myRT

myRT report for GCA_011604725.1_ASM1160472v1

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Seq: CP050069.1 Klebsiella aerogenes strain 035 plasmid p035_A-VIM-1, complete sequence (88962 bp)
Overview 1 RT 1: 7834-11993 bp 2 RT 2: 60866-64022 bp Neighborhood of RT #1 [7834, 11993] APH PHA02517 RVT-GII GIIM Rve Neighborhood of RT #2 [60866, 64039] Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 7834-8637 bp Ori: QIP27628.1 Gene: aph(3'')-Ib Feature: domain Description: APH Location: 7876-8629 bp Feature: domain Description: APH Location: 7876-8629 bp Feature: gene Location: 8744-9202 bp Feature: domain Description: PHA02517 Location: 8747-9194 bp Feature: domain Description: PHA0251 7 Location: 8747-91 94 bp Feature: gene Location: 9283-10791 bp Ori: QIP27704.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9541-10273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9541 -1 0273 bp Feature: domain Description: GIIM Note: maturase Location: 10348-10546 bp Feature: domain Description: GIIM Note: maturase Location: 1 0348-1 0546 bp Feature: gene Location: 11158-11862 bp Ori: QIP27629.1 Feature: domain Description: Rve Location: 11161-11806 bp Feature: domain Description: Rve Location: 1 1 1 61 -1 1 806 bp Feature: gene Location: 11916-11993 bp Feature: gene Location: 60866-61563 bp Feature: domain Description: Zn_Tnp_IS1 Location: 60872-60974 bp Feature: domain Description: Zn_Tnp_IS1 Location: 60872-60974 bp Feature: domain Description: HTH_Tnp_IS1 Location: 60995-61127 bp Feature: domain Description: HTH_Tnp_IS1 Location: 60995-61 1 27 bp Feature: gene Location: 61597-61722 bp Feature: gene Location: 61715-63202 bp Ori: QIP27679.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62120-62810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 621 20-6281 0 bp Feature: gene Location: 63515-63630 bp Feature: gene Location: 63608-64039 bp Ori: QIP27680.1 Gene: umuD Feature: domain Description: PRK10276 Location: 63659-64022 bp Feature: domain Description: PRK1 0276 Location: 63659-64022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APH (pfam01636), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Rve (COG3316), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)