myRT

myRT report for GCA_011765425.1_ASM1176542v1

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Seq: CP050285.1 Klebsiella pneumoniae strain 9630 chromosome, complete genome (5462775 bp)
Overview 1 RT 1: 591983-599479 bp 2 RT 2: 1766012-1769659 bp 3 RT 3: 2061473-2065628 bp 4 RT 4: 5379345-5385075 bp Neighborhood of RT #1 [591983, 599514] RVT-Retrons AAA_15 DUF4917 Neighborhood of RT #2 [1766012, 1769715] PRK10597 RVT-GII Laminin_G_3 Neighborhood of RT #3 [2061473, 2065628] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [5379345, 5385080] dam Phage_GPA RVT-GII DinI Feature: gene Location: 591983-593085 bp Feature: gene Location: 593239-593313 bp Feature: gene Location: 593644-594742 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 593827-594151 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 593827-5941 51 bp Feature: gene Location: 594855-597101 bp Ori: QIQ84750.1 Feature: domain Description: AAA_15 Location: 594858-595866 bp Feature: domain Description: AAA_1 5 Location: 594858-595866 bp Feature: gene Location: 598495-599514 bp Ori: QIQ82174.1 Feature: domain Description: DUF4917 Location: 598555-599479 bp Feature: domain Description: DUF491 7 Location: 598555-599479 bp Feature: gene Location: 1766012-1766260 bp Ori: QIQ82730.1 Feature: domain Description: PRK10597 Location: 1766015-1766255 bp Feature: domain Description: PRK1 0597 Location: 1 76601 5-1 766255 bp Feature: gene Location: 1766482-1766766 bp Feature: gene Location: 1766843-1768329 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1767248-1767374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 767248-1 767374 bp Feature: gene Location: 1768778-1768987 bp Feature: gene Location: 1768984-1769715 bp Ori: QIQ82732.1 Feature: domain Description: Laminin_G_3 Location: 1769320-1769659 bp Feature: domain Description: Laminin_G_3 Location: 1 769320-1 769659 bp Feature: gene Location: 2061473-2062737 bp Feature: domain Description: umuC Location: 2061476-2061962 bp Feature: domain Description: umuC Location: 2061 476-2061 962 bp Feature: gene Location: 2062740-2063158 bp Gene: umuD Feature: domain Description: PRK10276 Location: 2062743-2062968 bp Feature: domain Description: PRK1 0276 Location: 2062743-2062968 bp Feature: gene Location: 2063261-2064746 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2063666-2063840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2063666-2063840 bp Feature: gene Location: 2065144-2065386 bp Ori: QIQ82892.1 Feature: domain Description: DinI Location: 2065192-2065375 bp Feature: domain Description: DinI Location: 20651 92-2065375 bp Feature: gene Location: 2065386-2065628 bp Feature: gene Location: 5379345-5380196 bp Ori: QIQ84672.1 Feature: domain Description: dam Location: 5379348-5380119 bp Feature: domain Description: dam Location: 5379348-53801 1 9 bp Feature: gene Location: 5380193-5382576 bp Feature: domain Description: Phage_GPA Location: 5380757-5381723 bp Feature: domain Description: Phage_GPA Location: 5380757-5381 723 bp Feature: gene Location: 5383053-5384540 bp Ori: QIQ84673.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5383458-5384148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5383458-53841 48 bp Feature: gene Location: 5384647-5384835 bp Feature: gene Location: 5384847-5385080 bp Ori: QIQ84674.1 Feature: domain Description: DinI Location: 5384892-5385075 bp Feature: domain Description: DinI Location: 5384892-5385075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, Laminin_G_3 (pfam13385), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), dam (TIGR00571)
Phage_GPA (pfam05840)

Seq: CP050286.1 Klebsiella pneumoniae strain 9630 plasmid unnamed1, complete sequence (103455 bp)
Overview 1 RT 1: 30530-34053 bp Neighborhood of RT #1 [30530, 34070] StbA RVT-GII PRK10276 Feature: gene Location: 30530-31499 bp Feature: domain Description: StbA Location: 30533-31010 bp Feature: domain Description: StbA Location: 30533-31010 bp Feature: gene Location: 31630-31754 bp Feature: gene Location: 31747-33232 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32152-32842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 152 -32 842 bp Feature: gene Location: 33545-33661 bp Feature: gene Location: 33639-34070 bp Ori: QIQ84995.1 Gene: umuD Feature: domain Description: PRK10276 Location: 33690-34053 bp Feature: domain Description: PRK102 76 Location: 33690-34053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP050288.1 Klebsiella pneumoniae strain 9630 plasmid unnamed3, complete sequence (93415 bp)
Overview 1 RT 1: 69877-75038 bp Neighborhood of RT #1 [69877, 75038] umuC PRK10276 RVT-GII DUF2913 Feature: gene Location: 69877-70656 bp Ori: QIQ85201.1 Feature: domain Description: umuC Location: 69880-70642 bp Feature: domain Description: umuC Location: 69880-70642 bp Feature: gene Location: 70656-71081 bp Ori: QIQ85202.1 Gene: umuD Feature: domain Description: PRK10276 Location: 70707-71067 bp Feature: domain Description: PRK10276 Location: 70707-71067 bp Feature: gene Location: 71158-72645 bp Ori: QIQ85203.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71563-72253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71563 -72253 bp Feature: gene Location: 73058-73672 bp Ori: QIQ85204.1 Feature: domain Description: DUF2913 Location: 73088-73574 bp Feature: domain Description: DUF2913 Location: 73 088-73 574 bp Feature: gene Location: 74578-75038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DUF2913 (pfam11140)