myRT

myRT report for GCA_011769525.1_ASM1176952v1

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Seq: CP050442.1 Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence (61208 bp)
Overview 1 RT 1: 44205-52981 bp Neighborhood of RT #1 [44205, 53007] AcrB COG5421 RVT_N RVT-GII GIIM McrA DUF2808 Feature: gene Location: 44205-47375 bp Ori: QIR41819.1 Feature: domain Description: AcrB Location: 44226-47313 bp Feature: domain Description: AcrB Location: 44226-4731 3 bp Feature: gene Location: 47655-49172 bp Feature: domain Description: COG5421 Location: 47676-49068 bp Feature: domain Description: COG5421 Location: 47676-49068 bp Feature: gene Location: 49824-51626 bp Ori: QIR41820.1 Gene: ltrA Feature: domain Description: RVT_N Location: 49854-50100 bp Feature: domain Description: RVT_N Location: 49854-501 00 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50142-50823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501 42-50823 bp Feature: domain Description: GIIM Note: maturase Location: 50937-51156 bp Feature: domain Description: GIIM Note: maturase Location: 50937-51 1 56 bp Feature: domain Description: McrA Location: 51255-51543 bp Feature: domain Description: McrA Location: 51 255-51 543 bp Feature: gene Location: 51725-51922 bp Feature: gene Location: 52519-53007 bp Ori: QIR41821.1 Feature: domain Description: DUF2808 Location: 52636-52981 bp Feature: domain Description: DUF2808 Location: 52636-52981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrB (COG0841), COG5421 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF2808 (pfam10989)

Seq: CP050440.1 Tolypothrix sp. PCC 7910 chromosome, complete genome (8479123 bp)
Overview 1 RT 1: 2819943-2829798 bp 2 RT 2: 2846079-2850480 bp 3 RT 3: 7189475-7196996 bp Neighborhood of RT #1 [2819943, 2830076] TPR_12 TPR_12 TPR_12 TPR_12 TPR_10 TPR_12 TPR_12 TPR_12 CHAT DUF4384 RVT-CRISPR cas1 Cas_Cas1 Neighborhood of RT #2 [2846079, 2850480] RVT_N RVT-GII GIIM McrA Neighborhood of RT #3 [7189475, 7197019] DarT Macro_Poa1p_like YwgA YmdB RVT-CRISPR-like COG0610 DUF45 Feature: gene Location: 2819943-2823752 bp Ori: QIR37238.1 Feature: domain Description: TPR_12 Location: 2820006-2820189 bp Feature: domain Description: TPR_12 Location: 2 82 0006-2 82 0189 bp Feature: domain Description: TPR_12 Location: 2820213-2820438 bp Feature: domain Description: TPR_12 Location: 2 82 02 13-2 82 0438 bp Feature: domain Description: TPR_12 Location: 2820465-2820690 bp Feature: domain Description: TPR_12 Location: 2 82 0465-2 82 0690 bp Feature: domain Description: TPR_12 Location: 2820720-2820945 bp Feature: domain Description: TPR_12 Location: 2 82 072 0-2 82 0945 bp Feature: domain Description: TPR_10 Location: 2820975-2821092 bp Feature: domain Description: TPR_10 Location: 2 82 0975-2 82 1092 bp Feature: domain Description: TPR_12 Location: 2821101-2821320 bp Feature: domain Description: TPR_12 Location: 2 82 1101-2 82 132 0 bp Feature: domain Description: TPR_12 Location: 2821350-2821575 bp Feature: domain Description: TPR_12 Location: 2 82 1350-2 82 1575 bp Feature: domain Description: TPR_12 Location: 2821602-2821797 bp Feature: domain Description: TPR_12 Location: 2 82 1602 -2 82 1797 bp Feature: domain Description: CHAT Location: 2822592-2823717 bp Feature: domain Description: CHAT Location: 2 82 2 592 -2 82 3717 bp Feature: gene Location: 2823843-2824592 bp Ori: QIR37239.1 Feature: domain Description: DUF4384 Location: 2824224-2824452 bp Feature: domain Description: DUF4384 Location: 2 82 42 2 4-2 82 4452 bp Feature: gene Location: 2824817-2826823 bp Ori: QIR37240.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2825006-2825612 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 82 5006-2 82 5612 bp Feature: domain Description: cas1 Location: 2825828-2826791 bp Feature: domain Description: cas1 Location: 2 82 582 8-2 82 6791 bp Feature: gene Location: 2828237-2828671 bp Feature: gene Location: 2829033-2830076 bp Ori: QIR37242.1 Gene: cas1 Feature: domain Description: Cas_Cas1 Location: 2829045-2829798 bp Feature: domain Description: Cas_Cas1 Location: 2 82 9045-2 82 9798 bp Feature: gene Location: 2846079-2846324 bp Feature: gene Location: 2846764-2848566 bp Ori: QIR37254.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2846794-2847040 bp Feature: domain Description: RVT_N Location: 2 846794-2 847040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2847082-2847763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 847082 -2 847763 bp Feature: domain Description: GIIM Note: maturase Location: 2847877-2848096 bp Feature: domain Description: GIIM Note: maturase Location: 2 847877-2 848096 bp Feature: domain Description: McrA Location: 2848195-2848483 bp Feature: domain Description: McrA Location: 2 848195-2 848483 bp Feature: gene Location: 2849220-2849558 bp Feature: gene Location: 2849749-2850480 bp Feature: gene Location: 7189475-7190098 bp Ori: QIR40293.1 Feature: domain Description: DarT Location: 7189493-7190096 bp Feature: domain Description: DarT Location: 7189493-7190096 bp Feature: gene Location: 7190164-7191228 bp Ori: QIR40294.1 Feature: domain Description: Macro_Poa1p_like Location: 7190167-7190578 bp Feature: domain Description: Macro_Poa1p_like Location: 7190167-7190578 bp Feature: domain Description: YwgA Location: 7190725-7190887 bp Feature: domain Description: YwgA Location: 719072 5-7190887 bp Feature: domain Description: YmdB Location: 7190941-7191064 bp Feature: domain Description: YmdB Location: 7190941-7191064 bp Feature: gene Location: 7191206-7192726 bp Ori: QIR40295.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7191455-7192178 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7191455-7192 178 bp Feature: gene Location: 7193142-7196324 bp Ori: QIR40296.1 Feature: domain Description: COG0610 Location: 7193172-7196016 bp Feature: domain Description: COG0610 Location: 7193172 -7196016 bp Feature: gene Location: 7196321-7197019 bp Ori: QIR40297.1 Feature: domain Description: DUF45 Location: 7196381-7196996 bp Feature: domain Description: DUF45 Location: 7196381-7196996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_12 (pfam13424), TPR_10 (pfam13374), CHAT (pfam12770), DUF4384 (pfam14326), RVT-CRISPR, cas1 (TIGR00287), Cas_Cas1 (pfam01867), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)
McrA (COG4058), DarT, Macro_Poa1p_like, YwgA (COG3465), YmdB (pfam13277), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863)