myRT

myRT report for GCA_011769725.1_ASM1176972v1

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Seq: CP050364.1 Klebsiella pneumoniae strain 47733 plasmid p47733_CTX_M_15, complete sequence (119981 bp)
Overview 1 RT 1: 19923-24804 bp 2 RT 2: 44590-47746 bp 3 RT 3: 71556-75362 bp 4 RT 4: 92863-97729 bp Neighborhood of RT #1 [19923, 24929] PRK15417 DHFR RVT-GII GIIM MobC Rve Neighborhood of RT #2 [44590, 47763] Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Neighborhood of RT #3 [71556, 75388] N6_acetyl_AAC6 RVT-GII GIIM DUF1010 DHFR_1 Neighborhood of RT #4 [92863, 97791] PRK15417 DHFR RVT-GII group_II_RT_mat MobC Rve Feature: gene Location: 19923-20936 bp Ori: QIR47225.1 Gene: intI1 Feature: domain Description: PRK15417 Location: 19926-20934 bp Feature: domain Description: PRK1 541 7 Location: 1 9926-20934 bp Feature: gene Location: 21092-21565 bp Ori: QIR47226.1 Feature: domain Description: DHFR Location: 21101-21557 bp Feature: domain Description: DHFR Location: 21 1 01 -21 557 bp Feature: gene Location: 21634-22887 bp Ori: QIR47284.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21826-22450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 826-22450 bp Feature: domain Description: GIIM Note: maturase Location: 22489-22708 bp Feature: domain Description: GIIM Note: maturase Location: 22489-22708 bp Feature: gene Location: 23756-24022 bp Ori: QIR47227.1 Feature: domain Description: MobC Location: 23807-23927 bp Feature: domain Description: MobC Location: 23807-23927 bp Feature: gene Location: 24165-24929 bp Ori: QIR47228.1 Feature: domain Description: Rve Location: 24186-24804 bp Feature: domain Description: Rve Location: 241 86-24804 bp Feature: gene Location: 44590-45287 bp Feature: domain Description: Zn_Tnp_IS1 Location: 44596-44698 bp Feature: domain Description: Zn_Tnp_IS1 Location: 44596-44698 bp Feature: domain Description: HTH_Tnp_IS1 Location: 44719-44851 bp Feature: domain Description: HTH_Tnp_IS1 Location: 4471 9-44851 bp Feature: gene Location: 45321-45446 bp Feature: gene Location: 45439-46926 bp Ori: QIR47243.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45844-46534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45844-46534 bp Feature: gene Location: 47239-47354 bp Feature: gene Location: 47332-47763 bp Ori: QIR47244.1 Gene: umuD Feature: domain Description: PRK10276 Location: 47383-47746 bp Feature: domain Description: PRK1 0276 Location: 47383-47746 bp Feature: gene Location: 71556-71714 bp Feature: gene Location: 71944-72498 bp Ori: QIR47266.1 Gene: aac(6')-Ib Feature: domain Description: N6_acetyl_AAC6 Location: 71950-72496 bp Feature: domain Description: N6_acetyl_AAC6 Location: 71 950-72496 bp Feature: gene Location: 73219-74472 bp Ori: QIR47289.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73411-74035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7341 1 -74035 bp Feature: domain Description: GIIM Note: maturase Location: 74074-74293 bp Feature: domain Description: GIIM Note: maturase Location: 74074-74293 bp Feature: gene Location: 74519-74734 bp Ori: QIR47290.1 Feature: domain Description: DUF1010 Location: 74564-74717 bp Feature: domain Description: DUF1 01 0 Location: 74564-7471 7 bp Feature: gene Location: 74891-75388 bp Ori: QIR47267.1 Gene: dfrA12 Feature: domain Description: DHFR_1 Location: 74915-75362 bp Feature: domain Description: DHFR_1 Location: 7491 5-75362 bp Feature: gene Location: 92863-93876 bp Ori: QIR47276.1 Gene: intI1 Feature: domain Description: PRK15417 Location: 92866-93874 bp Feature: domain Description: PRK1 541 7 Location: 92866-93874 bp Feature: gene Location: 94032-94505 bp Ori: QIR47277.1 Feature: domain Description: DHFR Location: 94041-94497 bp Feature: domain Description: DHFR Location: 94041 -94497 bp Feature: gene Location: 94574-95638 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94580-94847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94580-94847 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 95144-95435 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 951 44-95435 bp Feature: gene Location: 96681-96945 bp Feature: domain Description: MobC Location: 96732-96798 bp Feature: domain Description: MobC Location: 96732-96798 bp Feature: gene Location: 97090-97791 bp Feature: domain Description: Rve Location: 97111-97729 bp Feature: domain Description: Rve Location: 971 1 1 -97729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), DHFR (cl17279), RVT-GII, GIIM (pfam08388), MobC (pfam05713), Rve (COG3316), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), N6_acetyl_AAC6 (TIGR04431)
DUF1010 (pfam06231), DHFR_1 (pfam00186), group_II_RT_mat (TIGR04416)

Seq: CP050360.1 Klebsiella pneumoniae strain 47733 chromosome, complete genome (5401559 bp)
Overview 1 RT 1: 499463-504767 bp 2 RT 2: 2946022-2948213 bp Neighborhood of RT #1 [499463, 504769] PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Neighborhood of RT #2 [2946022, 2948213] RVT-Retrons HTH_XRE Feature: gene Location: 499463-499882 bp Ori: QIR42418.1 Gene: umuD Feature: domain Description: PRK10276 Location: 499466-499877 bp Feature: domain Description: PRK102 76 Location: 499466-499877 bp Feature: gene Location: 499884-501149 bp Ori: QIR42419.1 Feature: domain Description: umuC Location: 499887-501147 bp Feature: domain Description: umuC Location: 499887-501147 bp Feature: gene Location: 501822-502730 bp Ori: QIR42420.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 502095-502551 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 502 095-502 551 bp Feature: gene Location: 502931-503599 bp Ori: QIR42421.1 Feature: domain Description: PRK09951 Location: 502934-503597 bp Feature: domain Description: PRK09951 Location: 502 934-503597 bp Feature: gene Location: 503804-504769 bp Ori: QIR42422.1 Gene: sapB Feature: domain Description: PRK15110 Location: 503807-504767 bp Feature: domain Description: PRK15110 Location: 503807-504767 bp Feature: gene Location: 2946022-2946216 bp Feature: gene Location: 2946215-2946646 bp Feature: gene Location: 2946785-2947735 bp Ori: QIR44651.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2946965-2947508 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 946965-2 947508 bp Feature: gene Location: 2947713-2948021 bp Ori: QIR44652.1 Feature: domain Description: HTH_XRE Location: 2947725-2947890 bp Feature: domain Description: HTH_XRE Location: 2 94772 5-2 947890 bp Feature: gene Location: 2948058-2948213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB), RVT-Retrons, HTH_XRE (smart00530)

Seq: CP050367.1 Klebsiella pneumoniae strain 47733 plasmid p47733_NDM_5, complete sequence (103085 bp)
Overview 1 RT 1: 25700-30597 bp 2 RT 2: 38315-48244 bp Neighborhood of RT #1 [25700, 31334] DUF1380 RVT_N RVT-GII GIIM HNHc DUF3560 Neighborhood of RT #2 [38315, 48246] Rve DUF1010 RVT-GII GIIM PRK13746 RVT-GII GIIM PRK13746 RVT-GII GIIM Multi_Drug_Res PRK13753 Feature: gene Location: 25700-26122 bp Ori: QIR47489.1 Feature: domain Description: DUF1380 Location: 25703-26000 bp Feature: domain Description: DUF13 80 Location: 25703 -26000 bp Feature: gene Location: 26119-26310 bp Feature: gene Location: 26624-28291 bp Ori: QIR47491.1 Gene: ltrA Feature: domain Description: RVT_N Location: 26672-26909 bp Feature: domain Description: RVT_N Location: 26672-26909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26960-27602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26960-27602 bp Feature: domain Description: GIIM Note: maturase Location: 27653-27887 bp Feature: domain Description: GIIM Note: maturase Location: 27653 -27887 bp Feature: domain Description: HNHc Note: nucleases Location: 28097-28256 bp Feature: domain Description: HNHc Note: nucleases Location: 28097-28256 bp Feature: gene Location: 29691-29921 bp Feature: gene Location: 29973-31334 bp Ori: QIR47493.1 Feature: domain Description: DUF3560 Location: 30240-30597 bp Feature: domain Description: DUF3 560 Location: 3 0240-3 0597 bp Feature: gene Location: 38315-39019 bp Ori: QIR47502.1 Feature: domain Description: Rve Location: 38318-38963 bp Feature: domain Description: Rve Location: 3 83 18-3 8963 bp Feature: gene Location: 39094-39309 bp Ori: QIR47564.1 Feature: domain Description: DUF1010 Location: 39139-39292 bp Feature: domain Description: DUF1010 Location: 3 913 9-3 9292 bp Feature: gene Location: 39356-40609 bp Ori: QIR47565.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39548-40172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9548-40172 bp Feature: domain Description: GIIM Note: maturase Location: 40211-40430 bp Feature: domain Description: GIIM Note: maturase Location: 40211-4043 0 bp Feature: gene Location: 41315-42106 bp Ori: QIR47503.1 Feature: domain Description: PRK13746 Location: 41318-42098 bp Feature: domain Description: PRK13 746 Location: 413 18-42098 bp Feature: gene Location: 42182-43435 bp Ori: QIR47566.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42374-42998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423 74-42998 bp Feature: domain Description: GIIM Note: maturase Location: 43037-43256 bp Feature: domain Description: GIIM Note: maturase Location: 43 03 7-43 256 bp Feature: gene Location: 44141-44932 bp Ori: QIR47504.1 Feature: domain Description: PRK13746 Location: 44144-44924 bp Feature: domain Description: PRK13 746 Location: 44144-44924 bp Feature: gene Location: 45008-46261 bp Ori: QIR47567.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45200-45824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45200-45824 bp Feature: domain Description: GIIM Note: maturase Location: 45863-46082 bp Feature: domain Description: GIIM Note: maturase Location: 45863 -46082 bp Feature: gene Location: 47066-47413 bp Ori: QIR47505.1 Feature: domain Description: Multi_Drug_Res Location: 47075-47348 bp Feature: domain Description: Multi_Drug_Res Location: 47075-473 48 bp Feature: gene Location: 47407-48246 bp Ori: QIR47506.1 Gene: sul1 Feature: domain Description: PRK13753 Location: 47410-48244 bp Feature: domain Description: PRK13 753 Location: 47410-48244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF3560 (pfam12083), Rve (COG3316), DUF1010 (pfam06231), PRK13746 (aminoglycoside resistance protein; Provisional), Multi_Drug_Res (pfam00893)
PRK13753 (dihydropteroate synthase; Provisional)

Seq: CP050361.1 Klebsiella pneumoniae strain 47733 plasmid p47733_ARR2, complete sequence (107451 bp)
Overview 1 RT 1: 105098-107891 bp Neighborhood of RT #1 [105098, 108070] PRK15417 Arr-ms RVT-GII GIIM Feature: gene Location: 105098-106111 bp Ori: QIR47204.1 Gene: intI1 Feature: domain Description: PRK15417 Location: 105101-106109 bp Feature: domain Description: PRK154 17 Location: 105101-106109 bp Feature: gene Location: 106284-106736 bp Ori: QIR47205.1 Feature: domain Description: Arr-ms Location: 106344-106650 bp Feature: domain Description: Arr-ms Location: 10634 4 -106650 bp Feature: gene Location: 106817-108070 bp Ori: QIR47206.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107009-107633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107009-107633 bp Feature: domain Description: GIIM Note: maturase Location: 107672-107891 bp Feature: domain Description: GIIM Note: maturase Location: 107672-107891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388)