myRT

myRT report for GCA_011769825.1_ASM1176982v1

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Seq: CP050380.1 Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence (353810 bp)
Overview 1 RT 1: 330588-337355 bp Neighborhood of RT #1 [330588, 337363] cas7_csf2 RVT-GII PRK10276 umuC Feature: gene Location: 330588-331295 bp Feature: gene Location: 331540-332331 bp Ori: QIR58803.1 Feature: domain Description: cas7_csf2 Location: 331861-332275 bp Feature: domain Description: cas7_csf2 Location: 331 861 -332275 bp Feature: gene Location: 334097-335584 bp Ori: QIR58768.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334502-335192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334502-3351 92 bp Feature: gene Location: 335670-336092 bp Ori: QIR58769.1 Gene: umuD Feature: domain Description: PRK10276 Location: 335676-336078 bp Feature: domain Description: PRK1 0276 Location: 335676-336078 bp Feature: gene Location: 336092-337363 bp Ori: QIR58770.1 Gene: umuC Feature: domain Description: umuC Location: 336095-337355 bp Feature: domain Description: umuC Location: 336095-337355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas7_csf2 (TIGR03115), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP050376.1 Klebsiella pneumoniae strain 51015 chromosome, complete genome (5306856 bp)
Overview 1 RT 1: 4663840-4670927 bp Neighborhood of RT #1 [4663840, 4670944] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 4663840-4664703 bp Ori: QIR57379.1 Feature: domain Description: PRK09692 Location: 4663864-4664701 bp Feature: domain Description: PRK09692 Location: 4663864-4664701 bp Feature: gene Location: 4664964-4665419 bp Ori: QIR58208.1 Feature: domain Description: Integrase_1 Location: 4664967-4665201 bp Feature: domain Description: Integrase_1 Location: 4664967-46652 01 bp Feature: gene Location: 4665461-4667542 bp Ori: QIR57380.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4665872-4666316 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4665872 -4666316 bp Feature: gene Location: 4667539-4670133 bp Ori: QIR57381.1 Feature: domain Description: FimD Location: 4667581-4670122 bp Feature: domain Description: FimD Location: 4667581-467012 2 bp Feature: gene Location: 4670180-4670944 bp Ori: QIR57382.1 Feature: domain Description: FimC Location: 4670225-4670927 bp Feature: domain Description: FimC Location: 46702 2 5-467092 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)