myRT

myRT report for GCA_012053325.1_ASM1205332v1

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Seq: CP050770.1 Salmonella enterica subsp. enterica serovar Indiana strain SI108 plasmid pSI108-1, complete sequence (145548 bp)
Overview 1 RT 1: 116365-120464 bp Neighborhood of RT #1 [116365, 120586] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 116365-116595 bp Feature: gene Location: 116858-117115 bp Feature: gene Location: 117995-119662 bp Ori: QIU60190.1 Gene: ltrA Feature: domain Description: RVT_N Location: 118043-118280 bp Feature: domain Description: RVT_N Location: 1 1 8043-1 1 8280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118331-118973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8331 -1 1 8973 bp Feature: domain Description: GIIM Note: maturase Location: 119024-119258 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 9024-1 1 9258 bp Feature: domain Description: HNHc Note: nucleases Location: 119468-119627 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 9468-1 1 9627 bp Feature: gene Location: 119976-120167 bp Feature: gene Location: 120164-120586 bp Ori: QIU60192.1 Feature: domain Description: DUF1380 Location: 120167-120464 bp Feature: domain Description: DUF1 380 Location: 1 201 67-1 20464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)