myRT

myRT report for GCA_012149945.1_ASM1214994v1

Download annotations/find similar RTs

Seq: AP022651.1 Escherichia coli 09-02E plasmid p1-09-02E DNA, complete genome (102029 bp)
Overview 1 RT 1: 13000-16824 bp 2 RT 2: 27163-29838 bp Neighborhood of RT #1 [13000, 16826] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [27163, 29846] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 13000-13404 bp Ori: BCA47863.1 Feature: domain Description: InsE Location: 13030-13366 bp Feature: domain Description: InsE Location: 1 3030-1 3366 bp Feature: gene Location: 13433-13789 bp Ori: BCA47864.1 Feature: domain Description: PHA02517 Location: 13436-13745 bp Feature: domain Description: PHA0251 7 Location: 1 3436-1 3745 bp Feature: gene Location: 13906-15429 bp Ori: BCA47865.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14179-14911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 79-1 491 1 bp Feature: domain Description: GIIM Note: maturase Location: 14986-15184 bp Feature: domain Description: GIIM Note: maturase Location: 1 4986-1 51 84 bp Feature: gene Location: 16021-16500 bp Ori: BCA47866.1 Feature: domain Description: PHA02517 Location: 16081-16435 bp Feature: domain Description: PHA0251 7 Location: 1 6081 -1 6435 bp Feature: gene Location: 16500-16826 bp Ori: BCA47867.1 Feature: domain Description: InsE Location: 16503-16824 bp Feature: domain Description: InsE Location: 1 6503-1 6824 bp Feature: gene Location: 27163-27489 bp Ori: BCA47883.1 Feature: domain Description: InsE Location: 27166-27487 bp Feature: domain Description: InsE Location: 271 66-27487 bp Feature: gene Location: 27489-27968 bp Ori: BCA47884.1 Feature: domain Description: PHA02517 Location: 27549-27903 bp Feature: domain Description: PHA0251 7 Location: 27549-27903 bp Feature: gene Location: 28560-29063 bp Ori: BCA47885.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28833-28905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28833-28905 bp Feature: gene Location: 29102-29422 bp Ori: BCA47886.1 Feature: domain Description: PRK10173 Location: 29105-29333 bp Feature: domain Description: PRK1 01 73 Location: 291 05-29333 bp Feature: gene Location: 29397-29846 bp Ori: BCA47887.1 Feature: domain Description: PRK10173 Location: 29400-29838 bp Feature: domain Description: PRK1 01 73 Location: 29400-29838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: AP022650.1 Escherichia coli 09-02E DNA, complete genome (5075911 bp)
Overview 1 RT 1: 4731693-4738084 bp Neighborhood of RT #1 [4731693, 4738110] YesN YesN YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 4731693-4732748 bp Ori: BCA47519.1 Feature: domain Description: YesN Location: 4731696-4732086 bp Feature: domain Description: YesN Location: 4731696-4732 086 bp Feature: domain Description: YesN Location: 4732428-4732725 bp Feature: domain Description: YesN Location: 4732 42 8-4732 72 5 bp Feature: gene Location: 4732765-4734027 bp Ori: BCA47520.1 Feature: domain Description: YesM Location: 4733278-4734019 bp Feature: domain Description: YesM Location: 47332 78-4734019 bp Feature: gene Location: 4734577-4735098 bp Ori: BCA47521.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4734583-4734865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4734583-4734865 bp Feature: domain Description: GIIM Note: maturase Location: 4734913-4735093 bp Feature: domain Description: GIIM Note: maturase Location: 4734913-4735093 bp Feature: gene Location: 4735126-4735539 bp Ori: BCA47522.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4735330-4735408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4735330-4735408 bp Feature: gene Location: 4736151-4737056 bp Feature: gene Location: 4737193-4738110 bp Ori: BCA47524.1 Feature: domain Description: PFLE_PFLC Location: 4737229-4738084 bp Feature: domain Description: PFLE_PFLC Location: 47372 2 9-4738084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesN (COG4753), YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)