myRT

myRT report for GCA_012222485.1_ASM1222248v1

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Seq: CP036376.1 Streptococcus agalactiae strain Sag153 chromosome, complete genome (2174504 bp)
Overview 1 RT 1: 633989-643557 bp 2 RT 2: 1890680-1893731 bp Neighborhood of RT #1 [633989, 643557] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Neighborhood of RT #2 [1890680, 1893733] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 633989-639430 bp Ori: QIW48866.1 Feature: domain Description: N6_Mtase Location: 635981-636572 bp Feature: domain Description: N6_Mtase Location: 635981 -636572 bp Feature: domain Description: COG4646 Location: 637166-639287 bp Feature: domain Description: COG4646 Location: 6371 66-639287 bp Feature: gene Location: 639404-639529 bp Feature: gene Location: 639928-641706 bp Ori: QIW48867.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640189-640981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6401 89-640981 bp Feature: domain Description: Intron_maturas2 Location: 641086-641317 bp Feature: domain Description: Intron_maturas2 Location: 641 086-641 31 7 bp Feature: domain Description: HNHc Note: nucleases Location: 641482-641668 bp Feature: domain Description: HNHc Note: nucleases Location: 641 482-641 668 bp Feature: gene Location: 641844-643187 bp Ori: QIW48868.1 Feature: domain Description: KOG1000 Location: 642123-642438 bp Feature: domain Description: KOG1 000 Location: 6421 23-642438 bp Feature: gene Location: 643258-643557 bp Feature: gene Location: 1890680-1891039 bp Ori: QIW50016.1 Feature: domain Description: HTH_XRE Location: 1890704-1890866 bp Feature: domain Description: HTH_XRE Location: 1 890704-1 890866 bp Feature: gene Location: 1891024-1891284 bp Feature: gene Location: 1891417-1892736 bp Ori: QIW50018.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1891717-1892350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 891 71 7-1 892350 bp Feature: domain Description: GIIM Note: maturase Location: 1892419-1892641 bp Feature: domain Description: GIIM Note: maturase Location: 1 89241 9-1 892641 bp Feature: gene Location: 1893166-1893243 bp Feature: gene Location: 1893317-1893733 bp Ori: QIW50019.1 Feature: domain Description: PRK07275 Location: 1893320-1893656 bp Feature: domain Description: PRK07275 Location: 1 893320-1 893656 bp Feature: domain Description: PRK07275 Location: 1893683-1893731 bp Feature: domain Description: PRK07275 Location: 1 893683-1 893731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), HTH_XRE (smart00530), GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)