myRT

myRT report for GCA_012272955.1_ASM1227295v1

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Seq: CP050953.1 Rhodococcus sp. DMU1 plasmid unnamed (716018 bp)
Overview 1 RT 1: 92645-96833 bp 2 RT 2: 141425-150716 bp Neighborhood of RT #1 [92645, 97021] IS5 Tra5 RVT-GII GIIM TetR_N TetR_C_24 TetR_N TetR_C_24 Aes Neighborhood of RT #2 [141425, 150751] STKc_PknB_like COG3903 TPR HTH_LUXR DDE_5 RVT-GII GIIM DUF4096 DDE_Tnp_1 fabG fabG Feature: gene Location: 92645-93643 bp Feature: domain Description: IS5 Location: 93137-93638 bp Feature: domain Description: IS5 Location: 931 37-93638 bp Feature: gene Location: 93673-94099 bp Feature: domain Description: Tra5 Location: 93679-93859 bp Feature: domain Description: Tra5 Location: 93679-93859 bp Feature: gene Location: 94126-94716 bp Ori: QIX53603.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94138-94315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 941 38-9431 5 bp Feature: domain Description: GIIM Note: maturase Location: 94396-94600 bp Feature: domain Description: GIIM Note: maturase Location: 94396-94600 bp Feature: gene Location: 94998-96263 bp Ori: QIX53604.1 Feature: domain Description: TetR_N Location: 95073-95199 bp Feature: domain Description: TetR_N Location: 95073-951 99 bp Feature: domain Description: TetR_C_24 Location: 95283-95601 bp Feature: domain Description: TetR_C_24 Location: 95283-95601 bp Feature: domain Description: TetR_N Location: 95697-95832 bp Feature: domain Description: TetR_N Location: 95697-95832 bp Feature: domain Description: TetR_C_24 Location: 95898-96234 bp Feature: domain Description: TetR_C_24 Location: 95898-96234 bp Feature: gene Location: 96563-97021 bp Ori: QIX53605.1 Feature: domain Description: Aes Location: 96656-96833 bp Feature: domain Description: Aes Location: 96656-96833 bp Feature: gene Location: 141425-144694 bp Ori: QIX53636.1 Feature: domain Description: STKc_PknB_like Location: 141518-142271 bp Feature: domain Description: STKc_PknB_like Location: 1 41 51 8-1 42271 bp Feature: domain Description: COG3903 Location: 142475-143705 bp Feature: domain Description: COG3903 Location: 1 42475-1 43705 bp Feature: domain Description: TPR Location: 143888-144173 bp Feature: domain Description: TPR Location: 1 43888-1 441 73 bp Feature: domain Description: HTH_LUXR Location: 144506-144671 bp Feature: domain Description: HTH_LUXR Location: 1 44506-1 44671 bp Feature: gene Location: 144988-146417 bp Feature: domain Description: DDE_5 Location: 145081-145864 bp Feature: domain Description: DDE_5 Location: 1 45081 -1 45864 bp Feature: gene Location: 146521-147792 bp Ori: QIX53637.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146737-147403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 46737-1 47403 bp Feature: domain Description: GIIM Note: maturase Location: 147496-147712 bp Feature: domain Description: GIIM Note: maturase Location: 1 47496-1 4771 2 bp Feature: gene Location: 148434-149232 bp Feature: domain Description: DUF4096 Location: 148455-148686 bp Feature: domain Description: DUF4096 Location: 1 48455-1 48686 bp Feature: domain Description: DDE_Tnp_1 Location: 148743-148893 bp Feature: domain Description: DDE_Tnp_1 Location: 1 48743-1 48893 bp Feature: gene Location: 150245-150751 bp Ori: QIX53638.1 Feature: domain Description: fabG Location: 150254-150341 bp Feature: domain Description: fabG Location: 1 50254-1 50341 bp Feature: domain Description: fabG Location: 150362-150716 bp Feature: domain Description: fabG Location: 1 50362-1 5071 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), TetR_N (pfam00440), TetR_C_24 (pfam17932), Aes (COG0657), STKc_PknB_like (cd14014), COG3903 (Predicted ATPase ), TPR (smart00028)
HTH_LUXR (smart00421), DDE_5 (pfam13546), DUF4096 (pfam13340), DDE_Tnp_1 (pfam01609), fabG (PRK12825)