myRT

myRT report for GCA_012273015.1_ASM1227301v1

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Seq: CP050954.1 Hymenobacter sp. BT18 chromosome, complete genome (4690582 bp)
Overview 1 RT 1: 4006836-4011470 bp Neighborhood of RT #1 [4006836, 4011475] PRK10276 umuC RVT_N RVT-GII GIIM McrA PolY_Pol_V_umuC DUF4113 COG3324 Feature: gene Location: 4006836-4007270 bp Ori: QIX62820.1 Gene: umuD Feature: domain Description: PRK10276 Location: 4006842-4007217 bp Feature: domain Description: PRK1 0276 Location: 4006842-400721 7 bp Feature: gene Location: 4007273-4007383 bp Feature: domain Description: umuC Location: 4007276-4007384 bp Feature: domain Description: umuC Location: 4007276-4007384 bp Feature: gene Location: 4007944-4009668 bp Ori: QIX62821.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4007977-4008220 bp Feature: domain Description: RVT_N Location: 4007977-4008220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4008265-4008934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4008265-4008934 bp Feature: domain Description: GIIM Note: maturase Location: 4009042-4009270 bp Feature: domain Description: GIIM Note: maturase Location: 4009042-4009270 bp Feature: domain Description: McrA Location: 4009339-4009621 bp Feature: domain Description: McrA Location: 4009339-4009621 bp Feature: gene Location: 4009776-4010933 bp Ori: QIX62822.1 Feature: domain Description: PolY_Pol_V_umuC Location: 4009779-4010712 bp Feature: domain Description: PolY_Pol_V_umuC Location: 4009779-401 071 2 bp Feature: domain Description: DUF4113 Location: 4010781-4010925 bp Feature: domain Description: DUF41 1 3 Location: 401 0781 -401 0925 bp Feature: gene Location: 4011056-4011475 bp Ori: QIX62823.1 Feature: domain Description: COG3324 Location: 4011143-4011470 bp Feature: domain Description: COG3324 Location: 401 1 1 43-401 1 470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PolY_Pol_V_umuC (cd01700), DUF4113 (pfam13438), COG3324 (Predicted enzyme related to lactoylglutathione lyase )