myRT

myRT report for GCA_012278555.1_ASM1227855v1

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Seq: CP033622.1 Dickeya zeae strain CE1 chromosome, complete genome (4714731 bp)
Overview 1 RT 1: 3695065-3701509 bp 2 RT 2: 3814919-3819304 bp 3 RT 3: 4503717-4509225 bp Neighborhood of RT #1 [3695065, 3701509] AAA_15 RVT-Retrons Neighborhood of RT #2 [3814919, 3819304] PRK10724 SmpB RVT-UG11 Neighborhood of RT #3 [4503717, 4509338] DarT UvrD UvrD RVT-Retrons HTH_XRE Feature: gene Location: 3695065-3695804 bp Feature: gene Location: 3696153-3698438 bp Ori: QIZ52236.1 Feature: domain Description: AAA_15 Location: 3696156-3697167 bp Feature: domain Description: AAA_1 5 Location: 36961 56-36971 67 bp Feature: gene Location: 3698524-3699636 bp Ori: QIZ52237.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3698701-3699235 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3698701 -3699235 bp Feature: gene Location: 3699916-3700252 bp Feature: gene Location: 3700529-3701509 bp Feature: gene Location: 3814919-3815353 bp Ori: QIZ52339.1 Feature: domain Description: PRK10724 Location: 3814922-3815351 bp Feature: domain Description: PRK1 0724 Location: 381 4922-381 5351 bp Feature: gene Location: 3815509-3815991 bp Ori: QIZ52340.1 Gene: smpB Feature: domain Description: SmpB Location: 3815539-3815983 bp Feature: domain Description: SmpB Location: 381 5539-381 5983 bp Feature: gene Location: 3816503-3817261 bp Ori: QIZ52341.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3816626-3817079 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 381 6626-381 7079 bp Feature: gene Location: 3817231-3817412 bp Feature: gene Location: 3818175-3819304 bp Feature: gene Location: 4503717-4504388 bp Ori: QIZ52927.1 Feature: domain Description: DarT Location: 4503765-4504362 bp Feature: domain Description: DarT Location: 4503765-4504362 bp Feature: gene Location: 4504388-4505788 bp Ori: QIZ52928.1 Feature: domain Description: UvrD Location: 4504418-4505273 bp Feature: domain Description: UvrD Location: 450441 8-4505273 bp Feature: domain Description: UvrD Location: 4505537-4505723 bp Feature: domain Description: UvrD Location: 4505537-4505723 bp Feature: gene Location: 4506676-4508355 bp Ori: QIZ52929.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4506805-4507423 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4506805-4507423 bp Feature: gene Location: 4508616-4508861 bp Feature: gene Location: 4509006-4509338 bp Ori: QIZ52931.1 Feature: domain Description: HTH_XRE Location: 4509045-4509225 bp Feature: domain Description: HTH_XRE Location: 4509045-4509225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, DarT, UvrD (COG0210), HTH_XRE (smart00530)