myRT

myRT report for GCA_012516315.1_ASM1251631v1

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Seq: CP051185.1 Limnospira fusiformis SAG 85.79 chromosome, complete genome (6423694 bp)
Overview 1 RT 1: 112082-117882 bp 2 RT 2: 252097-256037 bp 3 RT 3: 291742-300660 bp 4 RT 4: 509229-513184 bp 5 RT 5: 646525-650805 bp 6 RT 6: 742881-749556 bp 7 RT 7: 752243-755364 bp 8 RT 8: 759611-763183 bp 9 RT 9: 855049-860197 bp 10 RT 10: 1138173-1143524 bp 11 RT 11: 1189186-1193472 bp 12 RT 12: 1196764-1199751 bp 13 RT 13: 1557962-1561957 bp 14 RT 14: 1900451-1902850 bp 15 RT 15: 1977334-1983296 bp 16 RT 16: 2252559-2258956 bp 17 RT 17: 2612009-2614872 bp 18 RT 18: 2704870-2709949 bp 19 RT 19: 2758198-2766884 bp 20 RT 20: 2966290-2974243 bp 21 RT 21: 3119322-3130331 bp 22 RT 22: 3157389-3162821 bp 23 RT 23: 3169736-3173346 bp 24 RT 24: 3508126-3511863 bp 25 RT 25: 3744936-3751956 bp 26 RT 26: 3760467-3766639 bp 27 RT 27: 3824417-3830265 bp 28 RT 28: 4181505-4186923 bp 29 RT 29: 4226462-4229281 bp 30 RT 30: 4265127-4279881 bp 31 RT 31: 4317187-4325358 bp 32 RT 32: 4417433-4421328 bp 33 RT 33: 4425319-4429014 bp 34 RT 34: 4524723-4527796 bp 35 RT 35: 4842618-4847605 bp 36 RT 36: 4901158-4907128 bp 37 RT 37: 5011374-5016902 bp 38 RT 38: 5157676-5161111 bp 39 RT 39: 5270031-5274091 bp 40 RT 40: 5397143-5403454 bp Neighborhood of RT #1 [112082, 117971] Mo-nitro_C rSAM_fuse_unch rSAM_fuse_unch RVT_N RVT-GII GIIM McrA InsQ Neighborhood of RT #2 [252097, 256037] COG3415 DDE_3 RVT-GII COG3415 Neighborhood of RT #3 [291742, 300660] NACHT KOG0266 KOG0266 KOG0266 KOG0266 WD40 NAD_bind_1_Glu_DH Lys9 RVT_N RVT-GII GIIM PRK07459 Neighborhood of RT #4 [509229, 513255] RVT_N RVT-GII GIIM HNHc COG2452 InsQ Neighborhood of RT #5 [646525, 650915] HNHc RVT_N RVT-GII RVT_N DUF1400 Neighborhood of RT #6 [742881, 749594] GIIM RVT-GII RVT_N RVT_N RVT-GII GIIM McrA RVT-GII COG3415 DDE_3 COG3415 DDE_3 Neighborhood of RT #7 [752243, 755421] RVT_N RVT-GII group_II_RT_mat COG3415 Neighborhood of RT #8 [759611, 763183] RVT_N RVT-GII Neighborhood of RT #9 [855049, 860256] RVT_N RVT-GII GIIM McrA MrcB CcdA Neighborhood of RT #10 [1138173, 1143562] RVT-GII GIIM RVT_N RVT-GII RVT_N RVT-GII COG3415 DDE_3 Neighborhood of RT #11 [1189186, 1193510] GIIM HNHc COG3415 RVT_N RVT-GII HTH_23 HTH_33 DDE_3 Neighborhood of RT #12 [1196764, 1199930] RVT_N DDE_Tnp_1 RVT-GII GIIM RVT-GII DDE_Tnp_1 Neighborhood of RT #13 [1557962, 1561959] COG3415 HTH_Tnp_IS630 RVT_N RVT-GII RVT_N PRK13474 Neighborhood of RT #14 [1900451, 1902850] DDE_3 DDE_Tnp_1 RVT_N RVT-GII RVT_N Neighborhood of RT #15 [1977334, 1983319] PsbX InsQ RVT_N RVT-GII YkfC McrA Ycf19 accC Neighborhood of RT #16 [2252559, 2258973] MhpC PRK13331 RVT_N RVT-GII GIIM McrA STKc_PknB_like WD40 Neighborhood of RT #17 [2612009, 2614872] DUF3493 RVT-GII GIIM RVT-GII RVT_N Neighborhood of RT #18 [2704870, 2710047] RVT_N RVT-GII RVT-GII GIIM HNHc STKc_PknB_like YfmG DZR Neighborhood of RT #19 [2758198, 2766886] HemH PitA RVT_N RVT-GII GIIM HNH DUF1565 DUF1565 SLH SLH SLH PLN02244 Neighborhood of RT #20 [2966290, 2974243] InsQ RVT-GII RVT_N RVT-GII HNHc RVT_N RVT-GII GIIM Neighborhood of RT #21 [3119322, 3130369] RVT_N RVT-GII RVT-GII GIIM HNHc COG3415 DDE_3 RVT-GII DUF4277 DDE_Tnp_1 COG3415 DDE_3 Neighborhood of RT #22 [3157389, 3162821] ParE_toxin RVT-GII GIIM HNHc YkfC RVT-GII InsA Neighborhood of RT #23 [3169736, 3173435] RVT_N RVT_N RVT-GII GIIM McrA DUF2605 DUF2973 Neighborhood of RT #24 [3508126, 3511908] RVT_N RVT-GII GIIM DDE_3 COG3415 Neighborhood of RT #25 [3744936, 3751964] RVT_N RVT-GII GIIM McrA Cas10_III Cmr3_III-B Neighborhood of RT #26 [3760467, 3766639] Cas2_I_II_III Cas1_I-II-III Cas1_I-II-III RVT-CRISPR Cas1_I-II-III YjbI Pentapeptide Neighborhood of RT #27 [3824417, 3830776] Usp Usp argC RVT_N RVT-GII GIIM WcaA TPR TPR COG3415 Neighborhood of RT #28 [4181505, 4186988] COG3415 DDE_3 RVT_N RVT-GII RVT-GII GIIM RaiA Ribosom_S30AE_C OrfB_Zn_ribbon Neighborhood of RT #29 [4226462, 4229319] RVT-GII GIIM McrA COG3415 DDE_3 Neighborhood of RT #30 [4265127, 4280350] Crp PRK12309 RVT-GII GIIM HNHc RVT_N RVT-GII COG3415 DDE_3 InsA InsB RVT-GII COG3415 DDE_3 RVT-GII GIIM McrA SMC_prok_B SMC_prok_B COG3415 Neighborhood of RT #31 [4317187, 4325363] COG3744 NagA RVT_N RVT-GII GIIM DUF2839 DUF1815 RVT-GII KOG4178 Neighborhood of RT #32 [4417433, 4421372] DDE_Tnp_1 HNHc RVT-GII GIIM McrA RVT_N RVT-GII RVT_N Neighborhood of RT #33 [4425319, 4429014] YajQ_like DNA_processg_A RVT-GII GIIM HNHc COG3415 DDE_3 Neighborhood of RT #34 [4524723, 4527807] RVT-GII Usp Fdx Neighborhood of RT #35 [4842618, 4847634] MFS_MefA_like RVT_N RVT-GII GIIM HNHc secG COG5549 Neighborhood of RT #36 [4901158, 4907283] PRK07366 Thioredoxin YkfC RVT_N RVT-GII GIIM HNHc InsQ Neighborhood of RT #37 [5011374, 5016907] TsaE COG4828 RVT_N RVT-GII GIIM McrA LolD PRK07048 Neighborhood of RT #38 [5157676, 5161173] GIIM HNHc RVT-GII COG3415 DDE_3 DDE_3 Neighborhood of RT #39 [5270031, 5274667] RVT_N RVT-GII COG3415 DDE_3 COG3415 Neighborhood of RT #40 [5397143, 5403504] cobS ChW ChW ChW RVT_N RVT-GII GIIM HNH Tas Feature: gene Location: 112082-112372 bp Ori: QJB24554.1 Feature: domain Description: Mo-nitro_C Location: 112121-112361 bp Feature: domain Description: Mo-nitro_C Location: 1 1 21 21 -1 1 2361 bp Feature: gene Location: 112369-113994 bp Ori: QJB24555.1 Feature: domain Description: rSAM_fuse_unch Location: 112432-112555 bp Feature: domain Description: rSAM_fuse_unch Location: 1 1 2432-1 1 2555 bp Feature: domain Description: rSAM_fuse_unch Location: 112585-113959 bp Feature: domain Description: rSAM_fuse_unch Location: 1 1 2585-1 1 3959 bp Feature: gene Location: 114109-115884 bp Ori: QJB24556.1 Gene: ltrA Feature: domain Description: RVT_N Location: 114175-114418 bp Feature: domain Description: RVT_N Location: 1 1 41 75-1 1 441 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114463-115132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 4463-1 1 51 32 bp Feature: domain Description: GIIM Note: maturase Location: 115231-115441 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 5231 -1 1 5441 bp Feature: domain Description: McrA Location: 115576-115858 bp Feature: domain Description: McrA Location: 1 1 5576-1 1 5858 bp Feature: gene Location: 116168-116434 bp Feature: gene Location: 116784-117971 bp Feature: domain Description: InsQ Location: 116787-117882 bp Feature: domain Description: InsQ Location: 1 1 6787-1 1 7882 bp Feature: gene Location: 252097-252450 bp Feature: gene Location: 253174-254049 bp Ori: QJB24688.1 Feature: domain Description: COG3415 Location: 253183-253522 bp Feature: domain Description: COG341 5 Location: 2531 83-253522 bp Feature: domain Description: DDE_3 Location: 253591-254011 bp Feature: domain Description: DDE_3 Location: 253591 -25401 1 bp Feature: gene Location: 254055-254414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254148-254340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2541 48-254340 bp Feature: gene Location: 254669-255611 bp Feature: domain Description: COG3415 Location: 254675-255026 bp Feature: domain Description: COG341 5 Location: 254675-255026 bp Feature: gene Location: 255879-256037 bp Feature: gene Location: 291742-295962 bp Ori: QJB24718.1 Feature: domain Description: NACHT Location: 292576-293098 bp Feature: domain Description: NACHT Location: 292576-293098 bp Feature: domain Description: KOG0266 Location: 294058-294316 bp Feature: domain Description: KOG0266 Location: 294058-29431 6 bp Feature: domain Description: KOG0266 Location: 294352-294676 bp Feature: domain Description: KOG0266 Location: 294352-294676 bp Feature: domain Description: KOG0266 Location: 294712-295216 bp Feature: domain Description: KOG0266 Location: 29471 2-29521 6 bp Feature: domain Description: KOG0266 Location: 295261-295618 bp Feature: domain Description: KOG0266 Location: 295261 -29561 8 bp Feature: domain Description: WD40 Location: 295720-295834 bp Feature: domain Description: WD40 Location: 295720-295834 bp Feature: gene Location: 296215-297234 bp Ori: QJB24719.1 Feature: domain Description: NAD_bind_1_Glu_DH Location: 296272-296467 bp Feature: domain Description: NAD_bind_1 _Glu_DH Location: 296272-296467 bp Feature: domain Description: Lys9 Location: 296500-296782 bp Feature: domain Description: Lys9 Location: 296500-296782 bp Feature: gene Location: 298003-299511 bp Ori: QJB24720.1 Feature: domain Description: RVT_N Location: 298033-298279 bp Feature: domain Description: RVT_N Location: 298033-298279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298321-298981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298321 -298981 bp Feature: domain Description: GIIM Note: maturase Location: 299083-299320 bp Feature: domain Description: GIIM Note: maturase Location: 299083-299320 bp Feature: gene Location: 299730-300026 bp Gene: ssb Feature: domain Description: PRK07459 Location: 299733-300003 bp Feature: domain Description: PRK07459 Location: 299733-300003 bp Feature: gene Location: 300124-300660 bp Feature: gene Location: 509229-509470 bp Feature: gene Location: 509562-509786 bp Ori: QJB24897.1 Feature: domain Description: RVT_N Location: 509631-509781 bp Feature: domain Description: RVT_N Location: 509631 -509781 bp Feature: gene Location: 509916-511394 bp Ori: QJB29417.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509973-510642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509973-51 0642 bp Feature: domain Description: GIIM Note: maturase Location: 510741-510972 bp Feature: domain Description: GIIM Note: maturase Location: 51 0741 -51 0972 bp Feature: domain Description: HNHc Note: nucleases Location: 511185-511332 bp Feature: domain Description: HNHc Note: nucleases Location: 51 1 1 85-51 1 332 bp Feature: gene Location: 511575-512183 bp Feature: domain Description: COG2452 Location: 511590-512130 bp Feature: domain Description: COG2452 Location: 51 1 590-51 21 30 bp Feature: gene Location: 512278-513255 bp Ori: QJB24898.1 Feature: domain Description: InsQ Location: 512524-513184 bp Feature: domain Description: InsQ Location: 51 2524-51 31 84 bp Feature: gene Location: 646525-647745 bp Feature: gene Location: 648283-648756 bp Ori: QJB24991.1 Feature: domain Description: HNHc Note: nucleases Location: 648565-648706 bp Feature: domain Description: HNHc Note: nucleases Location: 648565-648706 bp Feature: gene Location: 648953-649861 bp Feature: domain Description: RVT_N Location: 648992-649073 bp Feature: domain Description: RVT_N Location: 648992-649073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 649118-649787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6491 1 8-649787 bp Feature: gene Location: 649883-650107 bp Ori: QJB24992.1 Feature: domain Description: RVT_N Location: 649952-650102 bp Feature: domain Description: RVT_N Location: 649952-6501 02 bp Feature: gene Location: 650331-650915 bp Feature: domain Description: DUF1400 Location: 650427-650805 bp Feature: domain Description: DUF1 400 Location: 650427-650805 bp Feature: gene Location: 742881-743288 bp Feature: domain Description: GIIM Note: maturase Location: 743061-743274 bp Feature: domain Description: GIIM Note: maturase Location: 743061 -743274 bp Feature: gene Location: 743291-744360 bp Feature: gene Location: 744527-744703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744548-744704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744548-744704 bp Feature: gene Location: 744916-745122 bp Feature: gene Location: 745434-745628 bp Feature: domain Description: RVT_N Location: 745473-745623 bp Feature: domain Description: RVT_N Location: 745473-745623 bp Feature: gene Location: 745650-747242 bp Ori: QJB25073.1 Gene: ltrA Feature: domain Description: RVT_N Location: 745689-745770 bp Feature: domain Description: RVT_N Location: 745689-745770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745815-746484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74581 5-746484 bp Feature: domain Description: GIIM Note: maturase Location: 746595-746799 bp Feature: domain Description: GIIM Note: maturase Location: 746595-746799 bp Feature: domain Description: McrA Location: 746958-747216 bp Feature: domain Description: McrA Location: 746958-74721 6 bp Feature: gene Location: 747320-747496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747323-747497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747323-747497 bp Feature: gene Location: 747679-748554 bp Ori: QJB25074.1 Feature: domain Description: COG3415 Location: 747688-748027 bp Feature: domain Description: COG341 5 Location: 747688-748027 bp Feature: domain Description: DDE_3 Location: 748096-748516 bp Feature: domain Description: DDE_3 Location: 748096-74851 6 bp Feature: gene Location: 748719-749594 bp Ori: QJB25075.1 Feature: domain Description: COG3415 Location: 748728-749067 bp Feature: domain Description: COG341 5 Location: 748728-749067 bp Feature: domain Description: DDE_3 Location: 749136-749556 bp Feature: domain Description: DDE_3 Location: 7491 36-749556 bp Feature: gene Location: 752243-752472 bp Feature: gene Location: 752563-752886 bp Feature: gene Location: 753013-754296 bp Gene: ltrA Feature: domain Description: RVT_N Location: 753052-753295 bp Feature: domain Description: RVT_N Location: 753052-753295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753340-754009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753340-754009 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 754072-754297 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 754072-754297 bp Feature: gene Location: 754511-754813 bp Feature: gene Location: 755025-755421 bp Feature: domain Description: COG3415 Location: 755034-755364 bp Feature: domain Description: COG341 5 Location: 755034-755364 bp Feature: gene Location: 759611-759790 bp Feature: gene Location: 761353-761610 bp Feature: gene Location: 761893-762489 bp Ori: QJB25084.1 Feature: domain Description: RVT_N Location: 761962-762205 bp Feature: domain Description: RVT_N Location: 761 962-762205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762250-762463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762250-762463 bp Feature: gene Location: 762627-762806 bp Feature: gene Location: 762992-763183 bp Feature: gene Location: 855049-855267 bp Feature: gene Location: 855501-855698 bp Feature: gene Location: 855993-857804 bp Ori: QJB25163.1 Gene: ltrA Feature: domain Description: RVT_N Location: 856059-856302 bp Feature: domain Description: RVT_N Location: 856059-856302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856347-857016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856347-85701 6 bp Feature: domain Description: GIIM Note: maturase Location: 857151-857361 bp Feature: domain Description: GIIM Note: maturase Location: 8571 51 -857361 bp Feature: domain Description: McrA Location: 857514-857778 bp Feature: domain Description: McrA Location: 85751 4-857778 bp Feature: gene Location: 857965-859899 bp Ori: QJB25164.1 Feature: domain Description: MrcB Location: 858073-859876 bp Feature: domain Description: MrcB Location: 858073-859876 bp Feature: gene Location: 860029-860256 bp Ori: QJB25165.1 Feature: domain Description: CcdA Location: 860071-860197 bp Feature: domain Description: CcdA Location: 860071 -8601 97 bp Feature: gene Location: 1138173-1138402 bp Feature: gene Location: 1138492-1138815 bp Feature: gene Location: 1138936-1139628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1138939-1139371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 38939-1 1 39371 bp Feature: domain Description: GIIM Note: maturase Location: 1139470-1139623 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 39470-1 1 39623 bp Feature: gene Location: 1139618-1140220 bp Ori: QJB25375.1 Feature: domain Description: RVT_N Location: 1139687-1139930 bp Feature: domain Description: RVT_N Location: 1 1 39687-1 1 39930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139975-1140203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 39975-1 1 40203 bp Feature: gene Location: 1140587-1140730 bp Feature: gene Location: 1140992-1141222 bp Feature: gene Location: 1141378-1141539 bp Feature: gene Location: 1142382-1142795 bp Ori: QJB25378.1 Feature: domain Description: RVT_N Location: 1142451-1142694 bp Feature: domain Description: RVT_N Location: 1 1 42451 -1 1 42694 bp Feature: gene Location: 1142755-1142979 bp Ori: QJB25379.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1142761-1142953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 42761 -1 1 42953 bp Feature: gene Location: 1143564-1143893 bp Ori: QJB25380.1 Feature: domain Description: COG3415 Location: 1143573-1143891 bp Feature: domain Description: COG341 5 Location: 1 1 43573-1 1 43891 bp Feature: gene Location: 1143017-1143562 bp Ori: QJB25380.1 Feature: domain Description: DDE_3 Location: 1143104-1143524 bp Feature: domain Description: DDE_3 Location: 1 1 431 04-1 1 43524 bp Feature: gene Location: 1189186-1189833 bp Feature: domain Description: GIIM Note: maturase Location: 1189195-1189387 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 891 95-1 1 89387 bp Feature: domain Description: HNHc Note: nucleases Location: 1189618-1189765 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 8961 8-1 1 89765 bp Feature: gene Location: 1189917-1190860 bp Feature: domain Description: COG3415 Location: 1189923-1190271 bp Feature: domain Description: COG341 5 Location: 1 1 89923-1 1 90271 bp Feature: gene Location: 1190874-1191977 bp Feature: domain Description: RVT_N Location: 1190913-1191156 bp Feature: domain Description: RVT_N Location: 1 1 9091 3-1 1 91 1 56 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1191201-1191873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 91 201 -1 1 91 873 bp Feature: gene Location: 1192156-1193222 bp Feature: domain Description: HTH_23 Location: 1192246-1192375 bp Feature: domain Description: HTH_23 Location: 1 1 92246-1 1 92375 bp Feature: domain Description: HTH_33 Location: 1192471-1192645 bp Feature: domain Description: HTH_33 Location: 1 1 92471 -1 1 92645 bp Feature: gene Location: 1193232-1193510 bp Feature: domain Description: DDE_3 Location: 1193250-1193472 bp Feature: domain Description: DDE_3 Location: 1 1 93250-1 1 93472 bp Feature: gene Location: 1196764-1197048 bp Feature: domain Description: RVT_N Location: 1196803-1197049 bp Feature: domain Description: RVT_N Location: 1 1 96803-1 1 97049 bp Feature: gene Location: 1197046-1198116 bp Ori: QJB25420.1 Feature: domain Description: DDE_Tnp_1 Location: 1197778-1197937 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 97778-1 1 97937 bp Feature: gene Location: 1198282-1199142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1198285-1198717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 98285-1 1 9871 7 bp Feature: domain Description: GIIM Note: maturase Location: 1198822-1199050 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 98822-1 1 99050 bp Feature: gene Location: 1199132-1199362 bp Ori: QJB25421.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1199138-1199345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 991 38-1 1 99345 bp Feature: gene Location: 1199322-1199432 bp Feature: gene Location: 1199433-1199930 bp Feature: domain Description: DDE_Tnp_1 Location: 1199619-1199751 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 9961 9-1 1 99751 bp Feature: gene Location: 1557962-1558784 bp Feature: domain Description: COG3415 Location: 1557971-1558301 bp Feature: domain Description: COG341 5 Location: 1 557971 -1 558301 bp Feature: gene Location: 1558982-1559855 bp Feature: domain Description: HTH_Tnp_IS630 Location: 1558997-1559330 bp Feature: domain Description: HTH_Tnp_IS630 Location: 1 558997-1 559330 bp Feature: gene Location: 1559922-1560423 bp Feature: domain Description: RVT_N Location: 1559961-1560042 bp Feature: domain Description: RVT_N Location: 1 559961 -1 560042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560087-1560315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 560087-1 56031 5 bp Feature: gene Location: 1560445-1560666 bp Ori: QJB25682.1 Feature: domain Description: RVT_N Location: 1560511-1560661 bp Feature: domain Description: RVT_N Location: 1 56051 1 -1 560661 bp Feature: gene Location: 1561420-1561959 bp Ori: QJB25683.1 Feature: domain Description: PRK13474 Location: 1561429-1561957 bp Feature: domain Description: PRK1 3474 Location: 1 561 429-1 561 957 bp Feature: gene Location: 1900451-1900826 bp Feature: domain Description: DDE_3 Location: 1900457-1900763 bp Feature: domain Description: DDE_3 Location: 1 900457-1 900763 bp Feature: gene Location: 1900845-1901747 bp Feature: domain Description: DDE_Tnp_1 Location: 1901400-1901568 bp Feature: domain Description: DDE_Tnp_1 Location: 1 901 400-1 901 568 bp Feature: gene Location: 1901749-1902111 bp Feature: domain Description: RVT_N Location: 1901788-1901869 bp Feature: domain Description: RVT_N Location: 1 901 788-1 901 869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1901914-1902103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 901 91 4-1 9021 03 bp Feature: gene Location: 1902133-1902357 bp Ori: QJB25952.1 Feature: domain Description: RVT_N Location: 1902202-1902352 bp Feature: domain Description: RVT_N Location: 1 902202-1 902352 bp Feature: gene Location: 1902596-1902850 bp Feature: gene Location: 1977334-1977456 bp Ori: QJB26004.1 Feature: domain Description: PsbX Location: 1977337-1977448 bp Feature: domain Description: PsbX Location: 1 977337-1 977448 bp Feature: gene Location: 1977681-1978844 bp Ori: QJB29485.1 Feature: domain Description: InsQ Location: 1977693-1978749 bp Feature: domain Description: InsQ Location: 1 977693-1 978749 bp Feature: gene Location: 1978897-1980705 bp Ori: QJB26005.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1978945-1979191 bp Feature: domain Description: RVT_N Location: 1 978945-1 9791 91 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1979233-1979902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 979233-1 979902 bp Feature: domain Description: YkfC Location: 1979968-1980268 bp Feature: domain Description: YkfC Location: 1 979968-1 980268 bp Feature: domain Description: McrA Location: 1980325-1980595 bp Feature: domain Description: McrA Location: 1 980325-1 980595 bp Feature: gene Location: 1981677-1981961 bp Ori: QJB26006.1 Feature: domain Description: Ycf19 Location: 1981707-1981947 bp Feature: domain Description: Ycf1 9 Location: 1 981 707-1 981 947 bp Feature: gene Location: 1981958-1983319 bp Ori: QJB26007.1 Gene: accC Feature: domain Description: accC Location: 1981967-1983296 bp Feature: domain Description: accC Location: 1 981 967-1 983296 bp Feature: gene Location: 2252559-2253431 bp Ori: QJB26236.1 Feature: domain Description: MhpC Location: 2252652-2253420 bp Feature: domain Description: MhpC Location: 2252652-2253420 bp Feature: gene Location: 2253411-2254193 bp Ori: QJB29504.1 Feature: domain Description: PRK13331 Location: 2253438-2254155 bp Feature: domain Description: PRK1 3331 Location: 2253438-22541 55 bp Feature: gene Location: 2254276-2256087 bp Ori: QJB26237.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2254342-2254585 bp Feature: domain Description: RVT_N Location: 2254342-2254585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2254630-2255299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2254630-2255299 bp Feature: domain Description: GIIM Note: maturase Location: 2255434-2255644 bp Feature: domain Description: GIIM Note: maturase Location: 2255434-2255644 bp Feature: domain Description: McrA Location: 2255797-2256061 bp Feature: domain Description: McrA Location: 2255797-2256061 bp Feature: gene Location: 2256382-2256579 bp Feature: gene Location: 2256955-2258973 bp Ori: QJB26238.1 Feature: domain Description: STKc_PknB_like Location: 2257054-2257834 bp Feature: domain Description: STKc_PknB_like Location: 2257054-2257834 bp Feature: domain Description: WD40 Location: 2258029-2258956 bp Feature: domain Description: WD40 Location: 2258029-2258956 bp Feature: gene Location: 2612009-2612290 bp Ori: QJB26507.1 Feature: domain Description: DUF3493 Location: 2612057-2612270 bp Feature: domain Description: DUF3493 Location: 261 2057-261 2270 bp Feature: gene Location: 2612451-2612931 bp Feature: gene Location: 2612938-2613654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2612941-2613370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 2941 -261 3370 bp Feature: domain Description: GIIM Note: maturase Location: 2613475-2613652 bp Feature: domain Description: GIIM Note: maturase Location: 261 3475-261 3652 bp Feature: gene Location: 2613644-2613874 bp Ori: QJB26508.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2613650-2613857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 3650-261 3857 bp Feature: gene Location: 2614139-2614363 bp Ori: QJB26509.1 Feature: domain Description: RVT_N Location: 2614208-2614358 bp Feature: domain Description: RVT_N Location: 261 4208-261 4358 bp Feature: gene Location: 2614645-2614872 bp Feature: gene Location: 2704870-2705472 bp Feature: gene Location: 2705569-2705941 bp Feature: gene Location: 2706295-2706867 bp Ori: QJB26588.1 Feature: domain Description: RVT_N Location: 2706334-2706577 bp Feature: domain Description: RVT_N Location: 2706334-2706577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2706622-2706850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2706622-2706850 bp Feature: gene Location: 2706857-2708047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2706860-2707289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2706860-2707289 bp Feature: domain Description: GIIM Note: maturase Location: 2707394-2707616 bp Feature: domain Description: GIIM Note: maturase Location: 2707394-270761 6 bp Feature: domain Description: HNHc Note: nucleases Location: 2707838-2707985 bp Feature: domain Description: HNHc Note: nucleases Location: 2707838-2707985 bp Feature: gene Location: 2708262-2709893 bp Ori: QJB26589.1 Feature: domain Description: STKc_PknB_like Location: 2708280-2708979 bp Feature: domain Description: STKc_PknB_like Location: 2708280-2708979 bp Feature: domain Description: YfmG Location: 2709024-2709888 bp Feature: domain Description: YfmG Location: 2709024-2709888 bp Feature: gene Location: 2709856-2710047 bp Ori: QJB26590.1 Feature: domain Description: DZR Location: 2709877-2709949 bp Feature: domain Description: DZR Location: 2709877-2709949 bp Feature: gene Location: 2758198-2759388 bp Ori: QJB26626.1 Feature: domain Description: HemH Location: 2758264-2759248 bp Feature: domain Description: HemH Location: 2758264-2759248 bp Feature: gene Location: 2759515-2760780 bp Ori: QJB29539.1 Feature: domain Description: PitA Location: 2759548-2760769 bp Feature: domain Description: PitA Location: 2759548-2760769 bp Feature: gene Location: 2761547-2763358 bp Ori: QJB26627.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2761613-2761856 bp Feature: domain Description: RVT_N Location: 2761 61 3-2761 856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2761901-2762570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2761 901 -2762570 bp Feature: domain Description: GIIM Note: maturase Location: 2762705-2762912 bp Feature: domain Description: GIIM Note: maturase Location: 2762705-276291 2 bp Feature: domain Description: HNH Note: nucleases Location: 2763176-2763311 bp Feature: domain Description: HNH Note: nucleases Location: 27631 76-276331 1 bp Feature: gene Location: 2763585-2766020 bp Ori: QJB26628.1 Feature: domain Description: DUF1565 Location: 2763615-2764407 bp Feature: domain Description: DUF1 565 Location: 276361 5-2764407 bp Feature: domain Description: DUF1565 Location: 2764497-2765298 bp Feature: domain Description: DUF1 565 Location: 2764497-2765298 bp Feature: domain Description: SLH Location: 2765454-2765574 bp Feature: domain Description: SLH Location: 2765454-2765574 bp Feature: domain Description: SLH Location: 2765634-2765757 bp Feature: domain Description: SLH Location: 2765634-2765757 bp Feature: domain Description: SLH Location: 2765820-2765946 bp Feature: domain Description: SLH Location: 2765820-2765946 bp Feature: gene Location: 2766032-2766886 bp Ori: QJB26629.1 Feature: domain Description: PLN02244 Location: 2766041-2766884 bp Feature: domain Description: PLN02244 Location: 2766041 -2766884 bp Feature: gene Location: 2966290-2967453 bp Ori: QJB29554.1 Feature: domain Description: InsQ Location: 2966302-2967358 bp Feature: domain Description: InsQ Location: 2966302-2967358 bp Feature: gene Location: 2967506-2968194 bp Feature: gene Location: 2968313-2968762 bp Ori: QJB29555.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2968316-2968751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296831 6-2968751 bp Feature: gene Location: 2968764-2969309 bp Ori: QJB26780.1 Feature: domain Description: RVT_N Location: 2968806-2969052 bp Feature: domain Description: RVT_N Location: 2968806-2969052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969094-2969307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969094-2969307 bp Feature: gene Location: 2970120-2970650 bp Ori: QJB26781.1 Feature: domain Description: HNHc Note: nucleases Location: 2970441-2970588 bp Feature: domain Description: HNHc Note: nucleases Location: 2970441 -2970588 bp Feature: gene Location: 2970766-2970995 bp Feature: gene Location: 2971086-2971409 bp Feature: gene Location: 2971536-2972819 bp Gene: ltrA Feature: domain Description: RVT_N Location: 2971575-2971818 bp Feature: domain Description: RVT_N Location: 2971 575-2971 81 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2971863-2972532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2971 863-2972532 bp Feature: domain Description: GIIM Note: maturase Location: 2972667-2972820 bp Feature: domain Description: GIIM Note: maturase Location: 2972667-2972820 bp Feature: gene Location: 2973692-2973921 bp Feature: gene Location: 2974055-2974243 bp Feature: gene Location: 3119322-3120374 bp Feature: gene Location: 3121433-3121660 bp Ori: QJB29566.1 Feature: domain Description: RVT_N Location: 3121436-3121538 bp Feature: domain Description: RVT_N Location: 31 21 436-31 21 538 bp Feature: gene Location: 3121599-3121850 bp Ori: QJB26884.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3121605-3121806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 21 605-31 21 806 bp Feature: gene Location: 3122558-3122737 bp Feature: gene Location: 3123133-3123312 bp Feature: gene Location: 3123708-3123887 bp Feature: gene Location: 3124955-3126109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3125003-3125450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 25003-31 25450 bp Feature: domain Description: GIIM Note: maturase Location: 3125555-3125756 bp Feature: domain Description: GIIM Note: maturase Location: 31 25555-31 25756 bp Feature: domain Description: HNHc Note: nucleases Location: 3125999-3126107 bp Feature: domain Description: HNHc Note: nucleases Location: 31 25999-31 261 07 bp Feature: gene Location: 3126128-3127003 bp Ori: QJB26888.1 Feature: domain Description: COG3415 Location: 3126137-3126476 bp Feature: domain Description: COG341 5 Location: 31 261 37-31 26476 bp Feature: domain Description: DDE_3 Location: 3126545-3126965 bp Feature: domain Description: DDE_3 Location: 31 26545-31 26965 bp Feature: gene Location: 3127245-3127505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3127323-3127488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 27323-31 27488 bp Feature: gene Location: 3127731-3129378 bp Feature: domain Description: DUF4277 Location: 3127737-3128058 bp Feature: domain Description: DUF4277 Location: 31 27737-31 28058 bp Feature: domain Description: DDE_Tnp_1 Location: 3128103-3128466 bp Feature: domain Description: DDE_Tnp_1 Location: 31 281 03-31 28466 bp Feature: gene Location: 3129494-3130369 bp Ori: QJB26889.1 Feature: domain Description: COG3415 Location: 3129503-3129878 bp Feature: domain Description: COG341 5 Location: 31 29503-31 29878 bp Feature: domain Description: DDE_3 Location: 3129911-3130331 bp Feature: domain Description: DDE_3 Location: 31 2991 1 -31 30331 bp Feature: gene Location: 3157389-3157691 bp Ori: QJB26904.1 Feature: domain Description: ParE_toxin Location: 3157404-3157665 bp Feature: domain Description: ParE_toxin Location: 31 57404-31 57665 bp Feature: gene Location: 3157676-3157864 bp Feature: gene Location: 3158222-3159394 bp Ori: QJB29569.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3158228-3158636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 58228-31 58636 bp Feature: domain Description: GIIM Note: maturase Location: 3158741-3158942 bp Feature: domain Description: GIIM Note: maturase Location: 31 58741 -31 58942 bp Feature: domain Description: HNHc Note: nucleases Location: 3159176-3159341 bp Feature: domain Description: HNHc Note: nucleases Location: 31 591 76-31 59341 bp Feature: gene Location: 3159434-3159661 bp Feature: gene Location: 3159711-3159890 bp Feature: gene Location: 3160251-3160430 bp Feature: gene Location: 3160595-3161005 bp Feature: gene Location: 3161143-3161760 bp Feature: domain Description: YkfC Location: 3161182-3161329 bp Feature: domain Description: YkfC Location: 31 61 1 82-31 61 329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3161521-3161734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 61 521 -31 61 734 bp Feature: gene Location: 3161792-3162184 bp Feature: domain Description: InsA Location: 3161795-3162050 bp Feature: domain Description: InsA Location: 31 61 795-31 62050 bp Feature: gene Location: 3162654-3162821 bp Feature: gene Location: 3169736-3169963 bp Ori: QJB26910.1 Feature: domain Description: RVT_N Location: 3169787-3169919 bp Feature: domain Description: RVT_N Location: 31 69787-31 6991 9 bp Feature: gene Location: 3169907-3170260 bp Feature: gene Location: 3170835-3172538 bp Ori: QJB26912.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3170874-3170955 bp Feature: domain Description: RVT_N Location: 31 70874-31 70955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3171000-3171669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 71 000-31 71 669 bp Feature: domain Description: GIIM Note: maturase Location: 3171780-3171987 bp Feature: domain Description: GIIM Note: maturase Location: 31 71 780-31 71 987 bp Feature: domain Description: McrA Location: 3172152-3172401 bp Feature: domain Description: McrA Location: 31 721 52-31 72401 bp Feature: gene Location: 3172588-3172929 bp Ori: QJB26913.1 Feature: domain Description: DUF2605 Location: 3172609-3172888 bp Feature: domain Description: DUF2605 Location: 31 72609-31 72888 bp Feature: gene Location: 3173124-3173435 bp Ori: QJB26914.1 Feature: domain Description: DUF2973 Location: 3173127-3173346 bp Feature: domain Description: DUF2973 Location: 31 731 27-31 73346 bp Feature: gene Location: 3508126-3508424 bp Feature: gene Location: 3508714-3508818 bp Feature: gene Location: 3509133-3510623 bp Ori: QJB27166.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3509187-3509430 bp Feature: domain Description: RVT_N Location: 35091 87-3509430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3509481-3510159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3509481 -351 01 59 bp Feature: domain Description: GIIM Note: maturase Location: 3510213-3510447 bp Feature: domain Description: GIIM Note: maturase Location: 351 021 3-351 0447 bp Feature: gene Location: 3511119-3511457 bp Feature: domain Description: DDE_3 Location: 3511122-3511419 bp Feature: domain Description: DDE_3 Location: 351 1 1 22-351 1 41 9 bp Feature: gene Location: 3511524-3511908 bp Feature: domain Description: COG3415 Location: 3511533-3511863 bp Feature: domain Description: COG341 5 Location: 351 1 533-351 1 863 bp Feature: gene Location: 3744936-3745205 bp Feature: gene Location: 3745349-3745528 bp Feature: gene Location: 3745884-3747641 bp Ori: QJB27340.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3745923-3746166 bp Feature: domain Description: RVT_N Location: 3745923-37461 66 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3746211-3746883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374621 1 -3746883 bp Feature: domain Description: GIIM Note: maturase Location: 3746988-3747201 bp Feature: domain Description: GIIM Note: maturase Location: 3746988-3747201 bp Feature: domain Description: McrA Location: 3747357-3747615 bp Feature: domain Description: McrA Location: 3747357-374761 5 bp Feature: gene Location: 3747717-3750800 bp Feature: domain Description: Cas10_III Location: 3748008-3750219 bp Feature: domain Description: Cas1 0_III Location: 3748008-375021 9 bp Feature: gene Location: 3750801-3751964 bp Ori: QJB27341.1 Feature: domain Description: Cmr3_III-B Location: 3750819-3751956 bp Feature: domain Description: Cmr3_III-B Location: 375081 9-3751 956 bp Feature: gene Location: 3760467-3760781 bp Ori: QJB27349.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 3760479-3760710 bp Feature: domain Description: Cas2_I_II_III Location: 3760479-376071 0 bp Feature: gene Location: 3760778-3761674 bp Ori: QJB27350.1 Gene: cas1 Feature: domain Description: Cas1_I-II-III Location: 3760790-3761150 bp Feature: domain Description: Cas1 _I-II-III Location: 3760790-3761 1 50 bp Feature: domain Description: Cas1_I-II-III Location: 3761300-3761636 bp Feature: domain Description: Cas1 _I-II-III Location: 3761 300-3761 636 bp Feature: gene Location: 3761899-3763863 bp Ori: QJB29604.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3762082-3762685 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3762082-3762685 bp Feature: domain Description: Cas1_I-II-III Location: 3762865-3763822 bp Feature: domain Description: Cas1 _I-II-III Location: 3762865-3763822 bp Feature: gene Location: 3765176-3765802 bp Ori: QJB27351.1 Feature: domain Description: YjbI Location: 3765227-3765500 bp Feature: domain Description: YjbI Location: 3765227-3765500 bp Feature: domain Description: Pentapeptide Location: 3765590-3765689 bp Feature: domain Description: Pentapeptide Location: 3765590-3765689 bp Feature: gene Location: 3765863-3766639 bp Feature: gene Location: 3824417-3825268 bp Ori: QJB27397.1 Feature: domain Description: Usp Location: 3824420-3824813 bp Feature: domain Description: Usp Location: 3824420-382481 3 bp Feature: domain Description: Usp Location: 3824840-3825257 bp Feature: domain Description: Usp Location: 3824840-3825257 bp Feature: gene Location: 3825316-3826377 bp Ori: QJB29609.1 Feature: domain Description: argC Location: 3825337-3826375 bp Feature: domain Description: argC Location: 3825337-3826375 bp Feature: gene Location: 3826472-3827587 bp Ori: QJB29610.1 Feature: domain Description: RVT_N Location: 3826523-3826637 bp Feature: domain Description: RVT_N Location: 3826523-3826637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3826982-3827195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3826982-38271 95 bp Feature: domain Description: GIIM Note: maturase Location: 3827282-3827507 bp Feature: domain Description: GIIM Note: maturase Location: 3827282-3827507 bp Feature: gene Location: 3828454-3829647 bp Ori: QJB27398.1 Feature: domain Description: WcaA Location: 3828457-3828868 bp Feature: domain Description: WcaA Location: 3828457-3828868 bp Feature: domain Description: TPR Location: 3828988-3829255 bp Feature: domain Description: TPR Location: 3828988-3829255 bp Feature: domain Description: TPR Location: 3829291-3829570 bp Feature: domain Description: TPR Location: 3829291 -3829570 bp Feature: gene Location: 3829914-3830776 bp Feature: domain Description: COG3415 Location: 3829923-3830265 bp Feature: domain Description: COG341 5 Location: 3829923-3830265 bp Feature: gene Location: 4181505-4182380 bp Ori: QJB27670.1 Feature: domain Description: COG3415 Location: 4181514-4181889 bp Feature: domain Description: COG341 5 Location: 41 81 51 4-41 81 889 bp Feature: domain Description: DDE_3 Location: 4181922-4182342 bp Feature: domain Description: DDE_3 Location: 41 81 922-41 82342 bp Feature: gene Location: 4182888-4183028 bp Feature: gene Location: 4183393-4183992 bp Ori: QJB27672.1 Feature: domain Description: RVT_N Location: 4183459-4183702 bp Feature: domain Description: RVT_N Location: 41 83459-41 83702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4183747-4183975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 83747-41 83975 bp Feature: gene Location: 4183982-4185203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4183985-4184414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 83985-41 8441 4 bp Feature: domain Description: GIIM Note: maturase Location: 4184549-4184771 bp Feature: domain Description: GIIM Note: maturase Location: 41 84549-41 84771 bp Feature: gene Location: 4185894-4186532 bp Ori: QJB27673.1 Gene: raiA Feature: domain Description: RaiA Location: 4185897-4186221 bp Feature: domain Description: RaiA Location: 41 85897-41 86221 bp Feature: domain Description: Ribosom_S30AE_C Location: 4186284-4186449 bp Feature: domain Description: Ribosom_S30AE_C Location: 41 86284-41 86449 bp Feature: gene Location: 4186737-4186988 bp Feature: domain Description: OrfB_Zn_ribbon Location: 4186749-4186923 bp Feature: domain Description: OrfB_Zn_ribbon Location: 41 86749-41 86923 bp Feature: gene Location: 4226462-4226704 bp Feature: gene Location: 4226927-4227076 bp Feature: gene Location: 4227318-4228421 bp Ori: QJB27699.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4227357-4227648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4227357-4227648 bp Feature: domain Description: GIIM Note: maturase Location: 4227756-4227963 bp Feature: domain Description: GIIM Note: maturase Location: 4227756-4227963 bp Feature: domain Description: McrA Location: 4228119-4228380 bp Feature: domain Description: McrA Location: 42281 1 9-4228380 bp Feature: gene Location: 4228426-4229319 bp Ori: QJB29631.1 Feature: domain Description: COG3415 Location: 4228453-4228822 bp Feature: domain Description: COG341 5 Location: 4228453-4228822 bp Feature: domain Description: DDE_3 Location: 4228861-4229281 bp Feature: domain Description: DDE_3 Location: 4228861 -4229281 bp Feature: gene Location: 4265127-4265495 bp Ori: QJB27720.1 Feature: domain Description: Crp Location: 4265163-4265481 bp Feature: domain Description: Crp Location: 42651 63-4265481 bp Feature: gene Location: 4265736-4266722 bp Ori: QJB27721.1 Feature: domain Description: PRK12309 Location: 4265739-4266717 bp Feature: domain Description: PRK1 2309 Location: 4265739-426671 7 bp Feature: gene Location: 4266811-4268034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4266814-4267246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426681 4-4267246 bp Feature: domain Description: GIIM Note: maturase Location: 4267381-4267591 bp Feature: domain Description: GIIM Note: maturase Location: 4267381 -4267591 bp Feature: domain Description: HNHc Note: nucleases Location: 4267825-4267984 bp Feature: domain Description: HNHc Note: nucleases Location: 4267825-4267984 bp Feature: gene Location: 4268542-4268709 bp Feature: gene Location: 4268935-4269471 bp Feature: domain Description: RVT_N Location: 4268977-4269217 bp Feature: domain Description: RVT_N Location: 4268977-426921 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4269262-4269472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4269262-4269472 bp Feature: gene Location: 4269785-4269979 bp Feature: gene Location: 4270606-4271481 bp Ori: QJB27723.1 Feature: domain Description: COG3415 Location: 4270615-4270954 bp Feature: domain Description: COG341 5 Location: 427061 5-4270954 bp Feature: domain Description: DDE_3 Location: 4271023-4271443 bp Feature: domain Description: DDE_3 Location: 4271 023-4271 443 bp Feature: gene Location: 4272878-4273195 bp Ori: QJB29635.1 Feature: domain Description: InsA Location: 4272881-4273139 bp Feature: domain Description: InsA Location: 4272881 -42731 39 bp Feature: gene Location: 4273197-4273559 bp Ori: QJB29635.1 Feature: domain Description: InsB Location: 4273203-4273518 bp Feature: domain Description: InsB Location: 4273203-427351 8 bp Feature: gene Location: 4273559-4273801 bp Ori: QJB29636.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4273577-4273733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4273577-4273733 bp Feature: gene Location: 4273785-4274114 bp Ori: QJB27727.1 Feature: domain Description: COG3415 Location: 4273794-4274112 bp Feature: domain Description: COG341 5 Location: 4273794-42741 1 2 bp Feature: gene Location: 4274116-4274661 bp Ori: QJB27727.1 Feature: domain Description: DDE_3 Location: 4274203-4274623 bp Feature: domain Description: DDE_3 Location: 4274203-4274623 bp Feature: gene Location: 4274936-4275103 bp Feature: gene Location: 4275543-4276784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4275591-4276044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4275591 -4276044 bp Feature: domain Description: GIIM Note: maturase Location: 4276131-4276344 bp Feature: domain Description: GIIM Note: maturase Location: 42761 31 -4276344 bp Feature: domain Description: McrA Location: 4276476-4276755 bp Feature: domain Description: McrA Location: 4276476-4276755 bp Feature: gene Location: 4277301-4279052 bp Ori: QJB27728.1 Feature: domain Description: SMC_prok_B Location: 4277499-4278279 bp Feature: domain Description: SMC_prok_B Location: 4277499-4278279 bp Feature: domain Description: SMC_prok_B Location: 4278336-4279032 bp Feature: domain Description: SMC_prok_B Location: 4278336-4279032 bp Feature: gene Location: 4279530-4280350 bp Feature: domain Description: COG3415 Location: 4279539-4279881 bp Feature: domain Description: COG341 5 Location: 4279539-4279881 bp Feature: gene Location: 4317187-4317588 bp Ori: QJB27768.1 Feature: domain Description: COG3744 Location: 4317196-4317565 bp Feature: domain Description: COG3744 Location: 431 71 96-431 7565 bp Feature: gene Location: 4317644-4318846 bp Ori: QJB27769.1 Gene: nagA Feature: domain Description: NagA Location: 4317725-4318724 bp Feature: domain Description: NagA Location: 431 7725-431 8724 bp Feature: gene Location: 4319561-4321066 bp Ori: QJB27770.1 Feature: domain Description: RVT_N Location: 4319606-4319852 bp Feature: domain Description: RVT_N Location: 431 9606-431 9852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4319936-4320560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 9936-4320560 bp Feature: domain Description: GIIM Note: maturase Location: 4320665-4320893 bp Feature: domain Description: GIIM Note: maturase Location: 4320665-4320893 bp Feature: gene Location: 4321156-4321335 bp Ori: QJB27771.1 Feature: domain Description: DUF2839 Location: 4321183-4321324 bp Feature: domain Description: DUF2839 Location: 4321 1 83-4321 324 bp Feature: gene Location: 4321752-4322096 bp Ori: QJB27772.1 Feature: domain Description: DUF1815 Location: 4321758-4322049 bp Feature: domain Description: DUF1 81 5 Location: 4321 758-4322049 bp Feature: gene Location: 4322861-4323083 bp Feature: gene Location: 4323105-4323497 bp Ori: QJB27773.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4323330-4323492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4323330-4323492 bp Feature: gene Location: 4323707-4323847 bp Feature: gene Location: 4324491-4325363 bp Ori: QJB29640.1 Feature: domain Description: KOG4178 Location: 4324509-4325358 bp Feature: domain Description: KOG41 78 Location: 4324509-4325358 bp Feature: gene Location: 4417433-4418335 bp Feature: domain Description: DDE_Tnp_1 Location: 4418006-4418156 bp Feature: domain Description: DDE_Tnp_1 Location: 441 8006-441 81 56 bp Feature: gene Location: 4418343-4418669 bp Feature: domain Description: HNHc Note: nucleases Location: 4418460-4418601 bp Feature: domain Description: HNHc Note: nucleases Location: 441 8460-441 8601 bp Feature: gene Location: 4418632-4419906 bp Ori: QJB27843.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4418635-4419061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 8635-441 9061 bp Feature: domain Description: GIIM Note: maturase Location: 4419169-4419376 bp Feature: domain Description: GIIM Note: maturase Location: 441 91 69-441 9376 bp Feature: domain Description: McrA Location: 4419505-4419796 bp Feature: domain Description: McrA Location: 441 9505-441 9796 bp Feature: gene Location: 4419896-4420306 bp Ori: QJB27844.1 Feature: domain Description: RVT_N Location: 4419935-4420016 bp Feature: domain Description: RVT_N Location: 441 9935-442001 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4420061-4420289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4420061 -4420289 bp Feature: gene Location: 4420881-4421234 bp Feature: gene Location: 4421178-4421372 bp Ori: QJB27846.1 Feature: domain Description: RVT_N Location: 4421202-4421328 bp Feature: domain Description: RVT_N Location: 4421 202-4421 328 bp Feature: gene Location: 4425319-4425810 bp Ori: QJB27850.1 Feature: domain Description: YajQ_like Location: 4425334-4425808 bp Feature: domain Description: YajQ_like Location: 4425334-4425808 bp Feature: gene Location: 4426073-4426576 bp Ori: QJB27851.1 Feature: domain Description: DNA_processg_A Location: 4426142-4426388 bp Feature: domain Description: DNA_processg_A Location: 44261 42-4426388 bp Feature: gene Location: 4426679-4427749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4426691-4426982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4426691 -4426982 bp Feature: domain Description: GIIM Note: maturase Location: 4427105-4427306 bp Feature: domain Description: GIIM Note: maturase Location: 44271 05-4427306 bp Feature: domain Description: HNHc Note: nucleases Location: 4427534-4427693 bp Feature: domain Description: HNHc Note: nucleases Location: 4427534-4427693 bp Feature: gene Location: 4427755-4428630 bp Ori: QJB27852.1 Feature: domain Description: COG3415 Location: 4427764-4428103 bp Feature: domain Description: COG341 5 Location: 4427764-44281 03 bp Feature: domain Description: DDE_3 Location: 4428172-4428592 bp Feature: domain Description: DDE_3 Location: 44281 72-4428592 bp Feature: gene Location: 4428826-4429014 bp Feature: gene Location: 4524723-4524931 bp Feature: gene Location: 4525284-4525472 bp Feature: gene Location: 4525464-4526653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4525467-4525896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4525467-4525896 bp Feature: gene Location: 4526956-4527432 bp Ori: QJB27967.1 Feature: domain Description: Usp Location: 4526965-4527412 bp Feature: domain Description: Usp Location: 4526965-452741 2 bp Feature: gene Location: 4527508-4527807 bp Ori: QJB27968.1 Feature: domain Description: Fdx Location: 4527517-4527796 bp Feature: domain Description: Fdx Location: 452751 7-4527796 bp Feature: gene Location: 4842618-4844117 bp Ori: QJB28197.1 Feature: domain Description: MFS_MefA_like Location: 4842879-4844094 bp Feature: domain Description: MFS_MefA_like Location: 4842879-4844094 bp Feature: gene Location: 4844251-4844526 bp Feature: gene Location: 4844809-4846572 bp Ori: QJB28198.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4844875-4845118 bp Feature: domain Description: RVT_N Location: 4844875-48451 1 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4845163-4845832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48451 63-4845832 bp Feature: domain Description: GIIM Note: maturase Location: 4845937-4846144 bp Feature: domain Description: GIIM Note: maturase Location: 4845937-48461 44 bp Feature: domain Description: HNHc Note: nucleases Location: 4846381-4846540 bp Feature: domain Description: HNHc Note: nucleases Location: 4846381 -4846540 bp Feature: gene Location: 4846697-4846927 bp Ori: QJB28199.1 Gene: secG Feature: domain Description: secG Location: 4846712-4846913 bp Feature: domain Description: secG Location: 484671 2-484691 3 bp Feature: gene Location: 4846915-4847634 bp Ori: QJB28200.1 Feature: domain Description: COG5549 Location: 4847035-4847605 bp Feature: domain Description: COG5549 Location: 4847035-4847605 bp Feature: gene Location: 4901158-4902357 bp Ori: QJB28238.1 Feature: domain Description: PRK07366 Location: 4901161-4902340 bp Feature: domain Description: PRK07366 Location: 4901 1 61 -4902340 bp Feature: gene Location: 4902406-4902735 bp Ori: QJB28239.1 Feature: domain Description: Thioredoxin Location: 4902421-4902724 bp Feature: domain Description: Thioredoxin Location: 4902421 -4902724 bp Feature: gene Location: 4903798-4905639 bp Gene: ltrA Feature: domain Description: YkfC Location: 4903870-4904017 bp Feature: domain Description: YkfC Location: 4903870-490401 7 bp Feature: domain Description: RVT_N Location: 4904083-4904164 bp Feature: domain Description: RVT_N Location: 4904083-49041 64 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4904209-4904881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4904209-4904881 bp Feature: domain Description: GIIM Note: maturase Location: 4904986-4905196 bp Feature: domain Description: GIIM Note: maturase Location: 4904986-49051 96 bp Feature: domain Description: HNHc Note: nucleases Location: 4905430-4905589 bp Feature: domain Description: HNHc Note: nucleases Location: 4905430-4905589 bp Feature: gene Location: 4906002-4906275 bp Feature: gene Location: 4906852-4907283 bp Ori: QJB28240.1 Feature: domain Description: InsQ Location: 4906915-4907128 bp Feature: domain Description: InsQ Location: 490691 5-49071 28 bp Feature: gene Location: 5011374-5011850 bp Ori: QJB28302.1 Feature: domain Description: TsaE Location: 5011398-5011806 bp Feature: domain Description: TsaE Location: 501 1 398-501 1 806 bp Feature: gene Location: 5011901-5012272 bp Ori: QJB28303.1 Feature: domain Description: COG4828 Location: 5011940-5012240 bp Feature: domain Description: COG4828 Location: 501 1 940-501 2240 bp Feature: gene Location: 5013101-5014885 bp Ori: QJB28304.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5013167-5013410 bp Feature: domain Description: RVT_N Location: 501 31 67-501 341 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5013455-5014124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501 3455-501 41 24 bp Feature: domain Description: GIIM Note: maturase Location: 5014229-5014436 bp Feature: domain Description: GIIM Note: maturase Location: 501 4229-501 4436 bp Feature: domain Description: McrA Location: 5014592-5014859 bp Feature: domain Description: McrA Location: 501 4592-501 4859 bp Feature: gene Location: 5015193-5015942 bp Ori: QJB28305.1 Feature: domain Description: LolD Location: 5015295-5015934 bp Feature: domain Description: LolD Location: 501 5295-501 5934 bp Feature: gene Location: 5015945-5016907 bp Ori: QJB28306.1 Feature: domain Description: PRK07048 Location: 5015960-5016902 bp Feature: domain Description: PRK07048 Location: 501 5960-501 6902 bp Feature: gene Location: 5157676-5158266 bp Ori: QJB29675.1 Feature: domain Description: GIIM Note: maturase Location: 5157679-5157823 bp Feature: domain Description: GIIM Note: maturase Location: 51 57679-51 57823 bp Feature: domain Description: HNHc Note: nucleases Location: 5158057-5158216 bp Feature: domain Description: HNHc Note: nucleases Location: 51 58057-51 5821 6 bp Feature: gene Location: 5158463-5159532 bp Feature: gene Location: 5159519-5159851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5159522-5159693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 59522-51 59693 bp Feature: gene Location: 5159869-5160744 bp Ori: QJB28400.1 Feature: domain Description: COG3415 Location: 5159878-5160217 bp Feature: domain Description: COG341 5 Location: 51 59878-51 6021 7 bp Feature: domain Description: DDE_3 Location: 5160286-5160706 bp Feature: domain Description: DDE_3 Location: 51 60286-51 60706 bp Feature: gene Location: 5160832-5161173 bp Feature: domain Description: DDE_3 Location: 5160844-5161111 bp Feature: domain Description: DDE_3 Location: 51 60844-51 61 1 1 1 bp Feature: gene Location: 5270031-5270321 bp Feature: gene Location: 5270627-5270794 bp Feature: gene Location: 5271854-5272663 bp Feature: domain Description: RVT_N Location: 5271893-5272136 bp Feature: domain Description: RVT_N Location: 5271 893-52721 36 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5272181-5272661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52721 81 -5272661 bp Feature: gene Location: 5272723-5273544 bp Feature: domain Description: COG3415 Location: 5272732-5273095 bp Feature: domain Description: COG341 5 Location: 5272732-5273095 bp Feature: domain Description: DDE_3 Location: 5273140-5273536 bp Feature: domain Description: DDE_3 Location: 52731 40-5273536 bp Feature: gene Location: 5273734-5274667 bp Feature: domain Description: COG3415 Location: 5273740-5274091 bp Feature: domain Description: COG341 5 Location: 5273740-5274091 bp Feature: gene Location: 5397143-5397943 bp Ori: QJB28603.1 Feature: domain Description: cobS Location: 5397206-5397929 bp Feature: domain Description: cobS Location: 5397206-5397929 bp Feature: gene Location: 5397954-5399201 bp Ori: QJB29694.1 Feature: domain Description: ChW Location: 5398815-5398908 bp Feature: domain Description: ChW Location: 539881 5-5398908 bp Feature: domain Description: ChW Location: 5398950-5399052 bp Feature: domain Description: ChW Location: 5398950-5399052 bp Feature: domain Description: ChW Location: 5399091-5399187 bp Feature: domain Description: ChW Location: 5399091 -53991 87 bp Feature: gene Location: 5399462-5401273 bp Ori: QJB28604.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5399528-5399771 bp Feature: domain Description: RVT_N Location: 5399528-5399771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5399816-5400485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 539981 6-5400485 bp Feature: domain Description: GIIM Note: maturase Location: 5400620-5400830 bp Feature: domain Description: GIIM Note: maturase Location: 5400620-5400830 bp Feature: domain Description: HNH Note: nucleases Location: 5401091-5401226 bp Feature: domain Description: HNH Note: nucleases Location: 5401 091 -5401 226 bp Feature: gene Location: 5402062-5402280 bp Feature: gene Location: 5402539-5403504 bp Ori: QJB28606.1 Feature: domain Description: Tas Location: 5402542-5403454 bp Feature: domain Description: Tas Location: 5402542-5403454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mo-nitro_C (pfam06967), rSAM_fuse_unch (TIGR03960), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675), COG3415 (Transposase ), DDE_3 (pfam13358), NACHT (pfam05729)
KOG0266 (KOG0266, WD40 repeat-containing protein ), WD40 (smart00320), NAD_bind_1_Glu_DH (cd01076), Lys9 (COG1748), PRK07459 (single-stranded DNA-binding protein; Provisional), HNHc (smart00507), COG2452 (Predicted site-specific integrase-resolvase ), DUF1400 (pfam07176), group_II_RT_mat (TIGR04416), MrcB (COG0744)
CcdA (pfam07362), HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_Tnp_1 (pfam01609), HTH_Tnp_IS630 (pfam01710), PRK13474 (cytochrome b6-f complex iron-sulfur subunit; Provisional), PsbX (pfam06596), YkfC (COG3344), Ycf19 (COG0762), accC (TIGR00514)
MhpC (COG0596), PRK13331 (pantothenate kinase; Reviewed), STKc_PknB_like (cd14014), DUF3493 (pfam11998), YfmG (COG1262), DZR (pfam12773), HemH (COG0276), PitA (COG0306), HNH (pfam01844), DUF1565 (pfam07602)
SLH (pfam00395), PLN02244 (tocopherol O-methyltransferase), DUF4277 (pfam14104), ParE_toxin (pfam05016), InsA (COG3677), DUF2605 (pfam10792), DUF2973 (pfam11189), Cas10_III (cl21742), Cmr3_III-B (cd09748), Cas2_I_II_III (cl11442)
Cas1_I-II-III (cl00656), RVT-CRISPR, YjbI (COG2346), Pentapeptide (pfam00805), Usp (pfam00582), argC (TIGR01850), WcaA (TIGR04017), TPR (smart00028), RaiA (COG1544), Ribosom_S30AE_C (pfam16321)
OrfB_Zn_ribbon (pfam07282), Crp (pfam00325), PRK12309 (transaldolase), InsB (COG1662), SMC_prok_B (TIGR02168), COG3744 (PIN domain nuclease, a component of toxin-antitoxin system (PIN domain) ), NagA (COG1820), DUF2839 (pfam10999), DUF1815 (pfam08844), KOG4178 (KOG4178, Soluble epoxide hydrolase )
YajQ_like (cl00723), DNA_processg_A (pfam02481), Fdx (COG0633), MFS_MefA_like (cd06173), secG (TIGR00810), COG5549 (Predicted Zn-dependent protease ), PRK07366 (LL-diaminopimelate aminotransferase), Thioredoxin (pfam00085), TsaE (pfam02367), COG4828 (Uncharacterized membrane protein )
LolD (COG1136), PRK07048 (threo-3-hydroxy-L-aspartate ammonia-lyase), cobS (TIGR00317), ChW (smart00728), Tas (COG0667)