myRT

myRT report for GCA_012516455.1_ASM1251645v1

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Seq: CP051219.1 Escherichia coli strain SFE8 chromosome, complete genome (5061372 bp)
Overview 1 RT 1: 697063-701650 bp 2 RT 2: 2013827-2018425 bp 3 RT 3: 2309262-2314234 bp Neighborhood of RT #1 [697063, 701650] IS285 InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [2013827, 2018451] DUF5339 Asparaginase_2 RVT-GII RVT-GII DcuC Neighborhood of RT #3 [2309262, 2314234] PHA02517 PHA02517 RVT-GII GIIM InsE Feature: gene Location: 697063-697854 bp Feature: domain Description: IS285 Location: 697066-697843 bp Feature: domain Description: IS285 Location: 697066-697843 bp Feature: gene Location: 697910-698649 bp Feature: domain Description: InsE Location: 697913-698249 bp Feature: domain Description: InsE Location: 69791 3-698249 bp Feature: gene Location: 699322-700830 bp Ori: QJB67516.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 699580-700312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 699580-70031 2 bp Feature: domain Description: GIIM Note: maturase Location: 700387-700585 bp Feature: domain Description: GIIM Note: maturase Location: 700387-700585 bp Feature: gene Location: 700911-701396 bp Feature: domain Description: PHA02517 Location: 700914-701385 bp Feature: domain Description: PHA0251 7 Location: 70091 4-701 385 bp Feature: gene Location: 701393-701650 bp Feature: gene Location: 2013827-2014105 bp Ori: QJB64887.1 Feature: domain Description: DUF5339 Location: 2013890-2014091 bp Feature: domain Description: DUF5339 Location: 201 3890-201 4091 bp Feature: gene Location: 2014443-2015474 bp Ori: QJB64888.1 Feature: domain Description: Asparaginase_2 Location: 2014533-2015466 bp Feature: domain Description: Asparaginase_2 Location: 201 4533-201 5466 bp Feature: gene Location: 2015882-2016046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2015885-2016041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 5885-201 6041 bp Feature: gene Location: 2015998-2016444 bp Ori: QJB64889.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2016304-2016406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 6304-201 6406 bp Feature: gene Location: 2016810-2017037 bp Feature: gene Location: 2017090-2018451 bp Ori: QJB64891.1 Gene: dcuC Feature: domain Description: DcuC Location: 2017093-2018425 bp Feature: domain Description: DcuC Location: 201 7093-201 8425 bp Feature: gene Location: 2309262-2309582 bp Ori: QJB65145.1 Feature: domain Description: PHA02517 Location: 2309271-2309574 bp Feature: domain Description: PHA0251 7 Location: 2309271 -2309574 bp Feature: gene Location: 2309691-2310152 bp Feature: domain Description: PHA02517 Location: 2309694-2310144 bp Feature: domain Description: PHA0251 7 Location: 2309694-231 01 44 bp Feature: gene Location: 2310233-2311741 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2310491-2311223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 0491 -231 1 223 bp Feature: domain Description: GIIM Note: maturase Location: 2311298-2311517 bp Feature: domain Description: GIIM Note: maturase Location: 231 1 298-231 1 51 7 bp Feature: gene Location: 2312414-2313111 bp Feature: domain Description: InsE Location: 2312444-2312708 bp Feature: domain Description: InsE Location: 231 2444-231 2708 bp Feature: gene Location: 2313396-2314234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DUF5339 (pfam17274), Asparaginase_2 (pfam01112), DcuC (TIGR00771)