myRT

myRT report for GCA_012848655.1_ASM1284865v1

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Seq: CP051649.1 Lactobacillus acetotolerans strain LJ49 chromosome, complete genome (1683950 bp)
Overview 1 RT 1: 427303-432743 bp 2 RT 2: 566638-571825 bp Neighborhood of RT #1 [427303, 432982] RVT-AbiK COG3464 COG3464 MATE_Wzx_like Neighborhood of RT #2 [566638, 571908] EIIBC-GUT PTSIIA_gutA RVT-GII GIIM RelB Transposase_mut Feature: gene Location: 427303-427443 bp Feature: gene Location: 427622-427759 bp Feature: gene Location: 428126-429937 bp Ori: QJD72820.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 428669-429059 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 428669-429059 bp Feature: gene Location: 430275-431330 bp Ori: QJD72821.1 Feature: domain Description: COG3464 Location: 430368-430863 bp Feature: domain Description: COG3464 Location: 430368-430863 bp Feature: domain Description: COG3464 Location: 430923-431277 bp Feature: domain Description: COG3464 Location: 430923-431 277 bp Feature: gene Location: 431519-432982 bp Ori: QJD72822.1 Feature: domain Description: MATE_Wzx_like Location: 431561-432743 bp Feature: domain Description: MATE_Wzx_like Location: 431 561 -432743 bp Feature: gene Location: 566638-567657 bp Ori: QJD72935.1 Feature: domain Description: EIIBC-GUT Location: 566656-567643 bp Feature: domain Description: EIIBC-GUT Location: 566656-567643 bp Feature: gene Location: 567674-568045 bp Ori: QJD72936.1 Feature: domain Description: PTSIIA_gutA Location: 567698-568031 bp Feature: domain Description: PTSIIA_gutA Location: 567698-568031 bp Feature: gene Location: 568720-570018 bp Ori: QJD73875.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568921-569539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568921 -569539 bp Feature: domain Description: GIIM Note: maturase Location: 569596-569806 bp Feature: domain Description: GIIM Note: maturase Location: 569596-569806 bp Feature: gene Location: 570359-570658 bp Ori: QJD72937.1 Feature: domain Description: RelB Location: 570410-570641 bp Feature: domain Description: RelB Location: 57041 0-570641 bp Feature: gene Location: 570730-571908 bp Ori: QJD72938.1 Feature: domain Description: Transposase_mut Location: 570763-571825 bp Feature: domain Description: Transposase_mut Location: 570763-571 825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, COG3464 (Transposase ), MATE_Wzx_like (cd13128), EIIBC-GUT (TIGR00825), PTSIIA_gutA (pfam03829), RVT-GII, GIIM (pfam08388), RelB (pfam04221), Transposase_mut (pfam00872)