myRT

myRT report for GCA_012933075.2_ASM1293307v2

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Seq: CP059816.1 Enterococcus faecium strain BP657 chromosome, complete genome (2826067 bp)
Overview 1 RT 1: 2694251-2699055 bp Neighborhood of RT #1 [2694251, 2699069] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 2694251-2695435 bp Ori: QMX60560.1 Feature: domain Description: HTH_XRE Location: 2694281-2694425 bp Feature: domain Description: HTH_XRE Location: 2694281 -2694425 bp Feature: domain Description: Rol_Rep_N Location: 2694458-2694722 bp Feature: domain Description: Rol_Rep_N Location: 2694458-2694722 bp Feature: domain Description: Rep_trans Location: 2694746-2695358 bp Feature: domain Description: Rep_trans Location: 2694746-2695358 bp Feature: gene Location: 2695432-2695569 bp Ori: QMX60561.1 Feature: domain Description: DUF3789 Location: 2695459-2695552 bp Feature: domain Description: DUF3789 Location: 2695459-2695552 bp Feature: gene Location: 2696315-2698225 bp Ori: QMX60562.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2696648-2697386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2696648-2697386 bp Feature: domain Description: HNHc Note: nucleases Location: 2697941-2698106 bp Feature: domain Description: HNHc Note: nucleases Location: 2697941 -26981 06 bp Feature: gene Location: 2698329-2698553 bp Feature: gene Location: 2698566-2699069 bp Ori: QMX60563.1 Feature: domain Description: ArdA Location: 2698584-2699055 bp Feature: domain Description: ArdA Location: 2698584-2699055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: CP059818.1 Enterococcus faecium strain BP657 plasmid pBP657_P2, complete sequence (28489 bp)
Overview 1 RT 1: 13539-20105 bp Neighborhood of RT #1 [13539, 20107] PinE Tra8 RVT-AbiP2 Tra8 HsdM Feature: gene Location: 13539-14102 bp Ori: QMX62243.1 Feature: domain Description: PinE Location: 13551-14097 bp Feature: domain Description: PinE Location: 13551-14097 bp Feature: gene Location: 14745-15698 bp Ori: QMX62215.1 Feature: domain Description: Tra8 Location: 14748-15675 bp Feature: domain Description: Tra8 Location: 14748-15675 bp Feature: gene Location: 15676-17151 bp Ori: QMX62216.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 16024-16489 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1602 4-16489 bp Feature: gene Location: 17304-18383 bp Ori: QMX62217.1 Feature: domain Description: Tra8 Location: 17337-18366 bp Feature: domain Description: Tra8 Location: 17337-18366 bp Feature: gene Location: 18878-20107 bp Feature: domain Description: HsdM Location: 18899-20105 bp Feature: domain Description: HsdM Location: 18899-2 0105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286)