myRT

myRT report for GCA_012933245.2_ASM1293324v2

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Seq: CP059739.1 Enterococcus faecium strain A4694 chromosome, complete genome (2731067 bp)
Overview 1 RT 1: 2599251-2604055 bp Neighborhood of RT #1 [2599251, 2604069] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 2599251-2600435 bp Ori: QMV87630.1 Feature: domain Description: HTH_XRE Location: 2599281-2599425 bp Feature: domain Description: HTH_XRE Location: 2599281 -2599425 bp Feature: domain Description: Rol_Rep_N Location: 2599458-2599722 bp Feature: domain Description: Rol_Rep_N Location: 2599458-2599722 bp Feature: domain Description: Rep_trans Location: 2599746-2600358 bp Feature: domain Description: Rep_trans Location: 2599746-2600358 bp Feature: gene Location: 2600432-2600569 bp Ori: QMV87631.1 Feature: domain Description: DUF3789 Location: 2600459-2600552 bp Feature: domain Description: DUF3789 Location: 2600459-2600552 bp Feature: gene Location: 2601315-2603225 bp Ori: QMV87632.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2601648-2602386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2601 648-2602386 bp Feature: domain Description: HNHc Note: nucleases Location: 2602941-2603106 bp Feature: domain Description: HNHc Note: nucleases Location: 2602941 -26031 06 bp Feature: gene Location: 2603329-2603553 bp Feature: gene Location: 2603566-2604069 bp Ori: QMV87633.1 Feature: domain Description: ArdA Location: 2603584-2604055 bp Feature: domain Description: ArdA Location: 2603584-2604055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: CP059742.1 Enterococcus faecium strain A4694 plasmid pA4694_P3, complete sequence (28489 bp)
Overview 1 RT 1: 13539-20105 bp Neighborhood of RT #1 [13539, 20107] PinE Tra8 RVT-AbiP2 Tra8 HsdM Feature: gene Location: 13539-14102 bp Ori: QMV89303.1 Feature: domain Description: PinE Location: 13551-14097 bp Feature: domain Description: PinE Location: 13551-14097 bp Feature: gene Location: 14745-15698 bp Ori: QMV89275.1 Feature: domain Description: Tra8 Location: 14748-15675 bp Feature: domain Description: Tra8 Location: 14748-15675 bp Feature: gene Location: 15676-17151 bp Ori: QMV89276.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 16024-16489 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1602 4-16489 bp Feature: gene Location: 17304-18383 bp Ori: QMV89277.1 Feature: domain Description: Tra8 Location: 17337-18366 bp Feature: domain Description: Tra8 Location: 17337-18366 bp Feature: gene Location: 18878-20107 bp Feature: domain Description: HsdM Location: 18899-20105 bp Feature: domain Description: HsdM Location: 18899-2 0105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286)