myRT

myRT report for GCA_012934535.1_ASM1293453v1

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Seq: CP051726.1 Escherichia coli strain SCU-112 plasmid pSCU-112-1, complete sequence (103780 bp)
Overview 1 RT 1: 5450-9921 bp 2 RT 2: 21870-26234 bp Neighborhood of RT #1 [5450, 10655] PRK09413 PHA02517 RVT-GII GIIM PHA02517 rve Neighborhood of RT #2 [21870, 26287] InsE RVT-GII GIIM PHA02517 autotrans_barl Feature: gene Location: 5450-5886 bp Feature: domain Description: PRK09413 Location: 5453-5813 bp Feature: domain Description: PRK0941 3 Location: 5453-581 3 bp Feature: gene Location: 5976-6455 bp Feature: domain Description: PHA02517 Location: 5979-6453 bp Feature: domain Description: PHA0251 7 Location: 5979-6453 bp Feature: gene Location: 6539-8047 bp Ori: QJG19687.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6797-7529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6797-7529 bp Feature: domain Description: GIIM Note: maturase Location: 7604-7802 bp Feature: domain Description: GIIM Note: maturase Location: 7604-7802 bp Feature: gene Location: 8720-9076 bp Feature: domain Description: PHA02517 Location: 8729-9077 bp Feature: domain Description: PHA0251 7 Location: 8729-9077 bp Feature: gene Location: 9156-10655 bp Ori: QJG19596.1 Feature: domain Description: rve Location: 9528-9921 bp Feature: domain Description: rve Location: 9528-9921 bp Feature: gene Location: 21870-22130 bp Feature: gene Location: 22232-22971 bp Feature: domain Description: InsE Location: 22235-22571 bp Feature: domain Description: InsE Location: 22235-22571 bp Feature: gene Location: 23644-25152 bp Ori: QJG19688.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23902-24634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23902-24634 bp Feature: domain Description: GIIM Note: maturase Location: 24709-24907 bp Feature: domain Description: GIIM Note: maturase Location: 24709-24907 bp Feature: gene Location: 25236-25715 bp Feature: domain Description: PHA02517 Location: 25239-25713 bp Feature: domain Description: PHA0251 7 Location: 25239-2571 3 bp Feature: gene Location: 25718-26287 bp Ori: QJG19606.1 Feature: domain Description: autotrans_barl Location: 25799-26234 bp Feature: domain Description: autotrans_barl Location: 25799-26234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), rve (pfam00665), InsE (COG2963), autotrans_barl (TIGR01414)