myRT

myRT report for GCA_012934595.1_ASM1293459v1

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Seq: CP051714.1 Escherichia coli strain SCU-122 chromosome, complete genome (4911026 bp)
Overview 1 RT 1: 4358513-4364907 bp Neighborhood of RT #1 [4358513, 4364930] PFLE_PFLC RVT-GII RVT-GII GIIM YesM YesN YesN Feature: gene Location: 4358513-4359430 bp Ori: QJG32458.1 Feature: domain Description: PFLE_PFLC Location: 4358549-4359404 bp Feature: domain Description: PFLE_PFLC Location: 4358549-4359404 bp Feature: gene Location: 4359567-4360472 bp Feature: gene Location: 4360958-4361349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4361288-4361348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4361 288-4361 348 bp Feature: gene Location: 4361525-4362046 bp Ori: QJG32460.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4361531-4361813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4361 531 -4361 81 3 bp Feature: domain Description: GIIM Note: maturase Location: 4361861-4362041 bp Feature: domain Description: GIIM Note: maturase Location: 4361 861 -4362041 bp Feature: gene Location: 4362629-4363858 bp Ori: QJG32461.1 Feature: domain Description: YesM Location: 4363109-4363850 bp Feature: domain Description: YesM Location: 43631 09-4363850 bp Feature: gene Location: 4363875-4364930 bp Ori: QJG32462.1 Feature: domain Description: YesN Location: 4363878-4364268 bp Feature: domain Description: YesN Location: 4363878-4364268 bp Feature: domain Description: YesN Location: 4364610-4364907 bp Feature: domain Description: YesN Location: 436461 0-4364907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972), YesN (COG4753)

Seq: CP051715.1 Escherichia coli strain SCU-122 plasmid pSCU-122-1, complete sequence (114224 bp)
Overview 1 RT 1: 12900-17088 bp 2 RT 2: 28302-32564 bp Neighborhood of RT #1 [12900, 17088] InsE PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [28302, 32788] rve PHA02517 RVT-GII PRK10173 Sigma70_r4_2 Sigma70_r4_2 Feature: gene Location: 12900-13304 bp Ori: QJG33127.1 Feature: domain Description: InsE Location: 12930-13266 bp Feature: domain Description: InsE Location: 12 930-132 66 bp Feature: gene Location: 13333-13716 bp Feature: domain Description: PHA02517 Location: 13339-13672 bp Feature: domain Description: PHA02 517 Location: 13339-13672 bp Feature: gene Location: 13806-15314 bp Ori: QJG33221.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14064-14796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14064-14796 bp Feature: domain Description: GIIM Note: maturase Location: 14871-15069 bp Feature: domain Description: GIIM Note: maturase Location: 14871-15069 bp Feature: gene Location: 15987-16726 bp Feature: domain Description: InsE Location: 15990-16326 bp Feature: domain Description: InsE Location: 15990-1632 6 bp Feature: gene Location: 16828-17088 bp Feature: gene Location: 28302-29801 bp Ori: QJG33137.1 Feature: domain Description: rve Location: 28674-29067 bp Feature: domain Description: rve Location: 2 8674-2 9067 bp Feature: gene Location: 29881-30237 bp Feature: domain Description: PHA02517 Location: 29890-30238 bp Feature: domain Description: PHA02 517 Location: 2 9890-302 38 bp Feature: gene Location: 30910-31398 bp Ori: QJG33222.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31168-31240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31168-312 40 bp Feature: gene Location: 31548-32181 bp Feature: domain Description: PRK10173 Location: 31551-31989 bp Feature: domain Description: PRK10173 Location: 31551-31989 bp Feature: gene Location: 32303-32788 bp Ori: QJG33138.1 Feature: domain Description: Sigma70_r4_2 Location: 32363-32435 bp Feature: domain Description: Sigma70_r4_2 Location: 32 363-32 435 bp Feature: domain Description: Sigma70_r4_2 Location: 32504-32564 bp Feature: domain Description: Sigma70_r4_2 Location: 32 504-32 564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), rve (pfam00665), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), Sigma70_r4_2 (pfam08281)