myRT

myRT report for GCA_012934715.1_ASM1293471v1

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Seq: CP051694.1 Escherichia coli strain SCU-313 chromosome, complete genome (5087909 bp)
Overview 1 RT 1: 851215-857606 bp 2 RT 2: 3998305-4003909 bp Neighborhood of RT #1 [851215, 857632] YesN YesN YesM RVT-GII GIIM RVT-GII PFLE_PFLC Neighborhood of RT #2 [3998305, 4003909] DDE_Tnp_1_assoc YhhI YhhI RVT-GII GIIM DDE_Tnp_1_assoc YhhI Feature: gene Location: 851215-852270 bp Ori: QJG52643.1 Feature: domain Description: YesN Location: 851218-851608 bp Feature: domain Description: YesN Location: 851 21 8-851 608 bp Feature: domain Description: YesN Location: 851950-852247 bp Feature: domain Description: YesN Location: 851 950-852247 bp Feature: gene Location: 852287-853516 bp Ori: QJG52644.1 Feature: domain Description: YesM Location: 852767-853508 bp Feature: domain Description: YesM Location: 852767-853508 bp Feature: gene Location: 854099-854620 bp Ori: QJG52645.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854105-854387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8541 05-854387 bp Feature: domain Description: GIIM Note: maturase Location: 854435-854615 bp Feature: domain Description: GIIM Note: maturase Location: 854435-85461 5 bp Feature: gene Location: 854796-855187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855126-855186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8551 26-8551 86 bp Feature: gene Location: 855673-856578 bp Feature: gene Location: 856715-857632 bp Ori: QJG52647.1 Feature: domain Description: PFLE_PFLC Location: 856751-857606 bp Feature: domain Description: PFLE_PFLC Location: 856751 -857606 bp Feature: gene Location: 3998305-3999425 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3998308-3998470 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 3998308-3998470 bp Feature: domain Description: YhhI Location: 3998785-3998854 bp Feature: domain Description: YhhI Location: 3998785-3998854 bp Feature: gene Location: 3999622-3999816 bp Feature: domain Description: YhhI Location: 3999631-3999802 bp Feature: domain Description: YhhI Location: 3999631 -3999802 bp Feature: gene Location: 3999893-4001143 bp Ori: QJG55363.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4000097-4000754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4000097-4000754 bp Feature: domain Description: GIIM Note: maturase Location: 4000835-4001057 bp Feature: domain Description: GIIM Note: maturase Location: 4000835-4001 057 bp Feature: gene Location: 4001675-4002634 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 4001678-4001843 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 4001 678-4001 843 bp Feature: domain Description: YhhI Location: 4002473-4002608 bp Feature: domain Description: YhhI Location: 4002473-4002608 bp Feature: gene Location: 4002947-4003909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesN (COG4753), YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494), DDE_Tnp_1_assoc (pfam13808), YhhI (COG5433)