myRT

myRT report for GCA_012934735.1_ASM1293473v1

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Seq: CP051693.1 Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence (104839 bp)
Overview 1 RT 1: 3809-8039 bp Neighborhood of RT #1 [3809, 8140] PRK13732 RVT_N RVT-GII GIIM HNHc AdoMet_MTases Feature: gene Location: 3809-4330 bp Ori: QJG60612.1 Feature: domain Description: PRK13732 Location: 3812-4328 bp Feature: domain Description: PRK1 3732 Location: 381 2-4328 bp Feature: gene Location: 4559-4753 bp Feature: gene Location: 5535-7202 bp Ori: QJG60613.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5583-5820 bp Feature: domain Description: RVT_N Location: 5583-5820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5871-6513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5871 -651 3 bp Feature: domain Description: GIIM Note: maturase Location: 6564-6798 bp Feature: domain Description: GIIM Note: maturase Location: 6564-6798 bp Feature: domain Description: HNHc Note: nucleases Location: 7008-7167 bp Feature: domain Description: HNHc Note: nucleases Location: 7008-71 67 bp Feature: gene Location: 7180-7596 bp Feature: gene Location: 7577-8140 bp Ori: QJG60614.1 Feature: domain Description: AdoMet_MTases Location: 7739-8039 bp Feature: domain Description: AdoMet_MTases Location: 7739-8039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), AdoMet_MTases (cl17173)

Seq: CP051692.1 Escherichia coli strain SCU-318 chromosome, complete genome (4914510 bp)
Overview 1 RT 1: 410340-415838 bp Neighborhood of RT #1 [410340, 415936] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI YhhI Feature: gene Location: 410340-411303 bp Feature: gene Location: 411660-412538 bp Feature: domain Description: YhhI Location: 411663-411963 bp Feature: domain Description: YhhI Location: 411663-411963 bp Feature: domain Description: YhhI Location: 412020-412374 bp Feature: domain Description: YhhI Location: 412 02 0-412 374 bp Feature: domain Description: YhhI Location: 412374-412539 bp Feature: domain Description: YhhI Location: 412 374-412 539 bp Feature: gene Location: 413103-414353 bp Ori: QJG56910.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413307-413964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413307-413964 bp Feature: domain Description: GIIM Note: maturase Location: 414045-414267 bp Feature: domain Description: GIIM Note: maturase Location: 414045-4142 67 bp Feature: gene Location: 414430-414624 bp Feature: domain Description: YhhI Location: 414439-414610 bp Feature: domain Description: YhhI Location: 414439-414610 bp Feature: gene Location: 414800-415936 bp Ori: QJG56911.1 Feature: domain Description: YhhI Location: 414803-415166 bp Feature: domain Description: YhhI Location: 414803-415166 bp Feature: domain Description: YhhI Location: 415223-415577 bp Feature: domain Description: YhhI Location: 4152 2 3-415577 bp Feature: domain Description: YhhI Location: 415595-415838 bp Feature: domain Description: YhhI Location: 415595-415838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)