myRT

myRT report for GCA_012935215.1_ASM1293521v1

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Seq: CP048290.1 Escherichia coli strain CVM N18EC0432 chromosome, complete genome (4933292 bp)
Overview 1 RT 1: 1507840-1510648 bp 2 RT 2: 3821018-3827008 bp Neighborhood of RT #1 [1507840, 1510659] RAYT IS285 RVT-GII InsE PHA02517 Neighborhood of RT #2 [3821018, 3827043] Psu RVT-UG7 PRK09692 proA Feature: gene Location: 1507840-1507968 bp Feature: domain Description: RAYT Location: 1507843-1507969 bp Feature: domain Description: RAYT Location: 1 507843-1 507969 bp Feature: gene Location: 1507976-1508643 bp Feature: domain Description: IS285 Location: 1508006-1508384 bp Feature: domain Description: IS285 Location: 1 508006-1 508384 bp Feature: gene Location: 1508786-1509248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1508798-1508993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 508798-1 508993 bp Feature: gene Location: 1509503-1509805 bp Ori: QJH49005.1 Feature: domain Description: InsE Location: 1509506-1509791 bp Feature: domain Description: InsE Location: 1 509506-1 509791 bp Feature: gene Location: 1509841-1510659 bp Ori: QJH49006.1 Feature: domain Description: PHA02517 Location: 1509856-1510648 bp Feature: domain Description: PHA0251 7 Location: 1 509856-1 51 0648 bp Feature: gene Location: 3821018-3821590 bp Ori: QJH51047.1 Feature: domain Description: Psu Location: 3821036-3821573 bp Feature: domain Description: Psu Location: 3821 036-3821 573 bp Feature: gene Location: 3821893-3822633 bp Feature: gene Location: 3822630-3824258 bp Ori: QJH51049.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3823038-3823467 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3823038-3823467 bp Feature: gene Location: 3824251-3825435 bp Ori: QJH51050.1 Feature: domain Description: PRK09692 Location: 3824257-3825412 bp Feature: domain Description: PRK09692 Location: 3824257-382541 2 bp Feature: gene Location: 3825790-3827043 bp Ori: QJH51051.1 Gene: proA Feature: domain Description: proA Location: 3825817-3827008 bp Feature: domain Description: proA Location: 382581 7-3827008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), IS285 (COG3328), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), Psu (pfam07455), RVT-UG7, PRK09692 (Integrase; provisional), proA (TIGR00407)