myRT

myRT report for GCA_012974525.1_ASM1297452v1

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Seq: CP052877.1 Escherichia coli strain C21 chromosome, complete genome (4757725 bp)
Overview 1 RT 1: 676424-682735 bp 2 RT 2: 3673682-3680275 bp Neighborhood of RT #1 [676424, 682743] IS285 InsE RVT-GII GIIM PHA02517 LldP Neighborhood of RT #2 [3673682, 3680275] XdhC PBP2_CrgA_like_5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 676424-677215 bp Feature: domain Description: IS285 Location: 676427-677204 bp Feature: domain Description: IS285 Location: 676427-677204 bp Feature: gene Location: 677271-678010 bp Feature: domain Description: InsE Location: 677274-677610 bp Feature: domain Description: InsE Location: 677274-67761 0 bp Feature: gene Location: 678683-680191 bp Ori: QJP83175.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678941-679673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678941 -679673 bp Feature: domain Description: GIIM Note: maturase Location: 679748-679946 bp Feature: domain Description: GIIM Note: maturase Location: 679748-679946 bp Feature: gene Location: 680272-680760 bp Feature: domain Description: PHA02517 Location: 680275-680749 bp Feature: domain Description: PHA0251 7 Location: 680275-680749 bp Feature: gene Location: 681190-682743 bp Ori: QJP79648.1 Feature: domain Description: LldP Location: 681202-682735 bp Feature: domain Description: LldP Location: 681 202-682735 bp Feature: gene Location: 3673682-3674638 bp Ori: QJP82247.1 Gene: paoD Feature: domain Description: XdhC Location: 3673760-3674615 bp Feature: domain Description: XdhC Location: 3673760-367461 5 bp Feature: gene Location: 3674617-3675027 bp Ori: QJP82248.1 Feature: domain Description: PBP2_CrgA_like_5 Location: 3674689-3675001 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 3674689-3675001 bp Feature: gene Location: 3675570-3677588 bp Ori: QJP82249.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3676143-3676596 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 36761 43-3676596 bp Feature: gene Location: 3677579-3678856 bp Ori: QJP82250.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3677867-3678362 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3677867-3678362 bp Feature: gene Location: 3679242-3679514 bp Ori: QJP82251.1 Feature: domain Description: PRK09678 Location: 3679251-3679413 bp Feature: domain Description: PRK09678 Location: 3679251 -367941 3 bp Feature: gene Location: 3679514-3680275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), LldP (COG1620), XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-UG8, RVT-UG3
PRK09678 (DNA-binding transcriptional regulator; Provisional)