myRT

myRT report for GCA_012974565.1_ASM1297456v1

Download annotations/find similar RTs

Seq: CP048920.1 Escherichia coli strain SCU-101 chromosome, complete genome (5357129 bp)
Overview 1 RT 1: 45029-47999 bp 2 RT 2: 101907-104256 bp Neighborhood of RT #1 [45029, 48025] CbtA_toxin CbeA_antitoxin RVT-GII GIIM CbeA_antitoxin DUF987 Neighborhood of RT #2 [101907, 104256] PHA02517 InsE RVT-GII Feature: gene Location: 45029-45406 bp Ori: QJP42522.1 Feature: domain Description: CbtA_toxin Location: 45032-45365 bp Feature: domain Description: CbtA_toxin Location: 45032-45365 bp Feature: gene Location: 45496-45579 bp Feature: domain Description: CbeA_antitoxin Location: 45505-45562 bp Feature: domain Description: CbeA_antitoxin Location: 45505-45562 bp Feature: gene Location: 46078-47349 bp Ori: QJP42523.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46315-46972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4631 5-46972 bp Feature: domain Description: GIIM Note: maturase Location: 47053-47275 bp Feature: domain Description: GIIM Note: maturase Location: 47053-47275 bp Feature: gene Location: 47386-47730 bp Ori: QJP42524.1 Feature: domain Description: CbeA_antitoxin Location: 47437-47683 bp Feature: domain Description: CbeA_antitoxin Location: 47437-47683 bp Feature: gene Location: 47804-48025 bp Ori: QJP42525.1 Feature: domain Description: DUF987 Location: 47807-47999 bp Feature: domain Description: DUF987 Location: 47807-47999 bp Feature: gene Location: 101907-102290 bp Feature: domain Description: PHA02517 Location: 102114-102288 bp Feature: domain Description: PHA0251 7 Location: 1 021 1 4-1 02288 bp Feature: gene Location: 102451-102660 bp Ori: QJP42476.1 Feature: domain Description: InsE Location: 102463-102637 bp Feature: domain Description: InsE Location: 1 02463-1 02637 bp Feature: gene Location: 102969-103064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102978-103059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 02978-1 03059 bp Feature: gene Location: 103314-103655 bp Feature: gene Location: 103995-104256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbtA_toxin (pfam06755), CbeA_antitoxin (pfam06154), RVT-GII, GIIM (pfam08388), DUF987 (pfam06174), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)