myRT

myRT report for GCA_012974585.1_ASM1297458v1

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Seq: CP048828.1 Acinetobacter baumannii strain ABF9692 plasmid pABF9692, complete sequence (264805 bp)
Overview 1 RT 1: 21258-26203 bp 2 RT 2: 28274-32172 bp Neighborhood of RT #1 [21258, 26220] PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [28274, 32172] TetM_leader PHA02517 RVT-GII GIIM InsE Feature: gene Location: 21258-23114 bp Feature: gene Location: 23164-23676 bp Ori: QJP39591.1 Feature: domain Description: PHA02517 Location: 23191-23653 bp Feature: domain Description: PHA0251 7 Location: 231 91 -23653 bp Feature: gene Location: 23729-24970 bp Ori: QJP39592.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23927-24584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23927-24584 bp Feature: domain Description: GIIM Note: maturase Location: 24662-24893 bp Feature: domain Description: GIIM Note: maturase Location: 24662-24893 bp Feature: gene Location: 25463-25906 bp Ori: QJP39593.1 Feature: domain Description: PHA02517 Location: 25532-25886 bp Feature: domain Description: PHA0251 7 Location: 25532-25886 bp Feature: gene Location: 25903-26220 bp Ori: QJP39594.1 Feature: domain Description: InsE Location: 25915-26203 bp Feature: domain Description: InsE Location: 2591 5-26203 bp Feature: gene Location: 28274-28390 bp Ori: QJP39596.1 Feature: domain Description: TetM_leader Location: 28307-28388 bp Feature: domain Description: TetM_leader Location: 28307-28388 bp Feature: gene Location: 28496-28981 bp Feature: domain Description: PHA02517 Location: 28499-28961 bp Feature: domain Description: PHA0251 7 Location: 28499-28961 bp Feature: gene Location: 29061-30302 bp Ori: QJP39597.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29259-29916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29259-2991 6 bp Feature: domain Description: GIIM Note: maturase Location: 29994-30225 bp Feature: domain Description: GIIM Note: maturase Location: 29994-30225 bp Feature: gene Location: 30816-31549 bp Feature: domain Description: InsE Location: 30828-31125 bp Feature: domain Description: InsE Location: 30828-31 1 25 bp Feature: gene Location: 31690-32172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), TetM_leader (pfam08076)

Seq: CP048827.1 Acinetobacter baumannii strain ABF9692 chromosome, complete genome (3861977 bp)
Overview 1 RT 1: 141850-145583 bp Neighborhood of RT #1 [141850, 145591] PinE RVT-GII PHA02517 DUF3363 Feature: gene Location: 141850-142416 bp Ori: QJP36154.1 Feature: domain Description: PinE Location: 141865-142408 bp Feature: domain Description: PinE Location: 141865-142 408 bp Feature: gene Location: 142599-143346 bp Feature: gene Location: 143860-145100 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144058-144709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144058-144709 bp Feature: gene Location: 145180-145461 bp Feature: domain Description: PHA02517 Location: 145183-145462 bp Feature: domain Description: PHA02 517 Location: 145183-145462 bp Feature: gene Location: 145460-145591 bp Feature: domain Description: DUF3363 Location: 145463-145583 bp Feature: domain Description: DUF3363 Location: 145463-145583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), DUF3363 (pfam11843)