myRT

myRT report for GCA_013009675.1_ASM1300967v1

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Seq: CP046424.1 Bacteroides dorei strain JR01 chromosome, complete genome (5511747 bp)
Overview 1 RT 1: 473911-487417 bp 2 RT 2: 817063-829301 bp 3 RT 3: 1356302-1362209 bp 4 RT 4: 1375765-1385499 bp 5 RT 5: 1534493-1540369 bp 6 RT 6: 1693504-1699608 bp 7 RT 7: 1733872-1738809 bp 8 RT 8: 1768946-1773834 bp 9 RT 9: 3267543-3273409 bp 10 RT 10: 3280286-3284659 bp 11 RT 11: 3453079-3457539 bp 12 RT 12: 3470396-3478502 bp 13 RT 13: 3624702-3634456 bp Neighborhood of RT #1 [473911, 487417] Bac_Flav_CT_J RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 DUF4134 RVT_N RVT-GII GIIM DUF4134 Neighborhood of RT #2 [817063, 829345] Bac_Flav_CT_J RVT-GII matK HNHc RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #3 [1356302, 1362679] Mob_Pre Toprim_2 RVT-GII Intron_maturas2 dnaG AAA_25 Neighborhood of RT #4 [1375765, 1385546] Bac_Flav_CT_J RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #5 [1534493, 1540839] Toprim_2 RVT-GII Intron_maturas2 AAA_25 Neighborhood of RT #6 [1693504, 1699616] DUF4099 DUF3945 NlpD RVT-GII Intron_maturas2 Toprim_2 dam Neighborhood of RT #7 [1733872, 1738809] SusD-like_3 SusD_RagB GDPD_like_2 RVT_N RVT-GII RVT-GII HTH_28 Neighborhood of RT #8 [1768946, 1773848] DUF3875 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Bac_Flav_CT_G Neighborhood of RT #9 [3267543, 3273486] PRK05182 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Bac_Flav_CT_G DUF4133 Neighborhood of RT #10 [3280286, 3285508] RVT_N RVT-GII GIIM COG2865 DDE_Tnp_IS66 Neighborhood of RT #11 [3453079, 3457562] DUF3876 DUF4141 RVT-GII matK HNHc Bac_Flav_CT_J Neighborhood of RT #12 [3470396, 3478582] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-UG8 RVT-UG3 HTH_17 HTH_17 Neighborhood of RT #13 [3624702, 3634497] Bac_Flav_CT_J RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Feature: gene Location: 473911-474915 bp Ori: QJR70953.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 473917-474886 bp Feature: domain Description: Bac_Flav_CT_J Location: 47391 7-474886 bp Feature: gene Location: 474919-475455 bp Feature: gene Location: 475448-477253 bp Ori: QJR70954.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475712-476534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47571 2-476534 bp Feature: domain Description: matK Location: 476711-476924 bp Feature: domain Description: matK Location: 47671 1 -476924 bp Feature: domain Description: HNHc Note: nucleases Location: 477086-477227 bp Feature: domain Description: HNHc Note: nucleases Location: 477086-477227 bp Feature: gene Location: 477804-478031 bp Ori: QJR70955.1 Feature: domain Description: DUF4141 Location: 477816-477972 bp Feature: domain Description: DUF41 41 Location: 47781 6-477972 bp Feature: gene Location: 478062-478445 bp Ori: QJR70956.1 Feature: domain Description: DUF3876 Location: 478143-478407 bp Feature: domain Description: DUF3876 Location: 4781 43-478407 bp Feature: gene Location: 478490-479080 bp Ori: QJR70957.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 478607-479063 bp Feature: domain Description: Bac_Flav_CT_G Location: 478607-479063 bp Feature: gene Location: 479083-480738 bp Ori: QJR70958.1 Gene: ltrA Feature: domain Description: RVT_N Location: 479137-479380 bp Feature: domain Description: RVT_N Location: 4791 37-479380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 479425-480073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 479425-480073 bp Feature: domain Description: GIIM Note: maturase Location: 480124-480358 bp Feature: domain Description: GIIM Note: maturase Location: 4801 24-480358 bp Feature: gene Location: 481368-483395 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 481371-483396 bp Feature: domain Description: Bac_Flav_CT_G Location: 481 371 -483396 bp Feature: gene Location: 483392-483724 bp Ori: QJR70959.1 Feature: domain Description: DUF4133 Location: 483410-483680 bp Feature: domain Description: DUF41 33 Location: 48341 0-483680 bp Feature: gene Location: 483735-483977 bp Ori: QJR70960.1 Feature: domain Description: DUF4134 Location: 483882-483972 bp Feature: domain Description: DUF41 34 Location: 483882-483972 bp Feature: gene Location: 483974-485629 bp Ori: QJR70961.1 Gene: ltrA Feature: domain Description: RVT_N Location: 484031-484268 bp Feature: domain Description: RVT_N Location: 484031 -484268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484319-484967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48431 9-484967 bp Feature: domain Description: GIIM Note: maturase Location: 485024-485255 bp Feature: domain Description: GIIM Note: maturase Location: 485024-485255 bp Feature: gene Location: 486245-486475 bp Ori: QJR70962.1 Feature: domain Description: DUF4134 Location: 486281-486461 bp Feature: domain Description: DUF41 34 Location: 486281 -486461 bp Feature: gene Location: 486677-487417 bp Feature: gene Location: 817063-818067 bp Ori: QJR71245.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 817072-818038 bp Feature: domain Description: Bac_Flav_CT_J Location: 81 7072-81 8038 bp Feature: gene Location: 818071-818607 bp Feature: gene Location: 818600-820405 bp Ori: QJR71246.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 818864-819686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 8864-81 9686 bp Feature: domain Description: matK Location: 819863-820076 bp Feature: domain Description: matK Location: 81 9863-820076 bp Feature: domain Description: HNHc Note: nucleases Location: 820238-820379 bp Feature: domain Description: HNHc Note: nucleases Location: 820238-820379 bp Feature: gene Location: 820755-820916 bp Feature: gene Location: 820959-821090 bp Feature: gene Location: 821083-822888 bp Ori: QJR71248.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 821347-822169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 821 347-8221 69 bp Feature: domain Description: matK Location: 822346-822559 bp Feature: domain Description: matK Location: 822346-822559 bp Feature: domain Description: HNHc Note: nucleases Location: 822721-822862 bp Feature: domain Description: HNHc Note: nucleases Location: 822721 -822862 bp Feature: gene Location: 823439-823666 bp Ori: QJR71249.1 Feature: domain Description: DUF4141 Location: 823451-823607 bp Feature: domain Description: DUF41 41 Location: 823451 -823607 bp Feature: gene Location: 823690-824070 bp Ori: QJR71250.1 Feature: domain Description: DUF3876 Location: 823771-824035 bp Feature: domain Description: DUF3876 Location: 823771 -824035 bp Feature: gene Location: 824111-824701 bp Ori: QJR71251.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 824228-824684 bp Feature: domain Description: Bac_Flav_CT_G Location: 824228-824684 bp Feature: gene Location: 824704-826359 bp Ori: QJR71252.1 Gene: ltrA Feature: domain Description: RVT_N Location: 824758-825001 bp Feature: domain Description: RVT_N Location: 824758-825001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825046-825694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825046-825694 bp Feature: domain Description: GIIM Note: maturase Location: 825745-825979 bp Feature: domain Description: GIIM Note: maturase Location: 825745-825979 bp Feature: gene Location: 826983-829016 bp Ori: QJR71253.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 826986-829011 bp Feature: domain Description: Bac_Flav_CT_G Location: 826986-82901 1 bp Feature: gene Location: 829013-829345 bp Ori: QJR71254.1 Feature: domain Description: DUF4133 Location: 829031-829301 bp Feature: domain Description: DUF41 33 Location: 829031 -829301 bp Feature: gene Location: 1356302-1357642 bp Ori: QJR71608.1 Feature: domain Description: Mob_Pre Location: 1356308-1356938 bp Feature: domain Description: Mob_Pre Location: 1 356308-1 356938 bp Feature: gene Location: 1357826-1358749 bp Ori: QJR74711.1 Feature: domain Description: Toprim_2 Location: 1358357-1358639 bp Feature: domain Description: Toprim_2 Location: 1 358357-1 358639 bp Feature: gene Location: 1358739-1360547 bp Ori: QJR71609.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1359003-1359825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 359003-1 359825 bp Feature: domain Description: Intron_maturas2 Location: 1359894-1360203 bp Feature: domain Description: Intron_maturas2 Location: 1 359894-1 360203 bp Feature: gene Location: 1361110-1361277 bp Feature: domain Description: dnaG Location: 1361179-1361278 bp Feature: domain Description: dnaG Location: 1 361 1 79-1 361 278 bp Feature: gene Location: 1361606-1362679 bp Ori: QJR71610.1 Feature: domain Description: AAA_25 Location: 1361744-1362209 bp Feature: domain Description: AAA_25 Location: 1 361 744-1 362209 bp Feature: gene Location: 1375765-1376790 bp Ori: QJR71626.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 1375783-1376749 bp Feature: domain Description: Bac_Flav_CT_J Location: 1 375783-1 376749 bp Feature: gene Location: 1376810-1377346 bp Feature: gene Location: 1377339-1379144 bp Ori: QJR71628.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377603-1378425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 377603-1 378425 bp Feature: domain Description: matK Location: 1378602-1378815 bp Feature: domain Description: matK Location: 1 378602-1 37881 5 bp Feature: domain Description: HNHc Note: nucleases Location: 1378977-1379118 bp Feature: domain Description: HNHc Note: nucleases Location: 1 378977-1 3791 1 8 bp Feature: gene Location: 1379695-1379922 bp Ori: QJR71629.1 Feature: domain Description: DUF4141 Location: 1379707-1379863 bp Feature: domain Description: DUF41 41 Location: 1 379707-1 379863 bp Feature: gene Location: 1379927-1380283 bp Ori: QJR71630.1 Feature: domain Description: DUF3876 Location: 1379990-1380260 bp Feature: domain Description: DUF3876 Location: 1 379990-1 380260 bp Feature: gene Location: 1380312-1380905 bp Ori: QJR71631.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1380429-1380888 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 380429-1 380888 bp Feature: gene Location: 1380908-1382563 bp Ori: QJR71632.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1380962-1381205 bp Feature: domain Description: RVT_N Location: 1 380962-1 381 205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1381250-1381898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 381 250-1 381 898 bp Feature: domain Description: GIIM Note: maturase Location: 1381949-1382183 bp Feature: domain Description: GIIM Note: maturase Location: 1 381 949-1 3821 83 bp Feature: gene Location: 1383193-1385217 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1383196-1385218 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 3831 96-1 38521 8 bp Feature: gene Location: 1385214-1385546 bp Ori: QJR71633.1 Feature: domain Description: DUF4133 Location: 1385232-1385499 bp Feature: domain Description: DUF41 33 Location: 1 385232-1 385499 bp Feature: gene Location: 1534493-1535896 bp Feature: gene Location: 1536111-1537022 bp Ori: QJR74717.1 Feature: domain Description: Toprim_2 Location: 1536645-1536933 bp Feature: domain Description: Toprim_2 Location: 1 536645-1 536933 bp Feature: gene Location: 1537012-1538820 bp Ori: QJR71738.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1537276-1538098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 537276-1 538098 bp Feature: domain Description: Intron_maturas2 Location: 1538167-1538476 bp Feature: domain Description: Intron_maturas2 Location: 1 5381 67-1 538476 bp Feature: gene Location: 1539383-1539550 bp Feature: gene Location: 1539763-1540839 bp Ori: QJR74718.1 Feature: domain Description: AAA_25 Location: 1539907-1540369 bp Feature: domain Description: AAA_25 Location: 1 539907-1 540369 bp Feature: gene Location: 1693504-1694643 bp Ori: QJR71858.1 Feature: domain Description: DUF4099 Location: 1693882-1694122 bp Feature: domain Description: DUF4099 Location: 1 693882-1 6941 22 bp Feature: domain Description: DUF3945 Location: 1694233-1694404 bp Feature: domain Description: DUF3945 Location: 1 694233-1 694404 bp Feature: gene Location: 1694967-1695326 bp Ori: QJR74726.1 Feature: domain Description: NlpD Location: 1694973-1695291 bp Feature: domain Description: NlpD Location: 1 694973-1 695291 bp Feature: gene Location: 1696073-1697881 bp Ori: QJR71859.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1696337-1697159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 696337-1 6971 59 bp Feature: domain Description: Intron_maturas2 Location: 1697228-1697537 bp Feature: domain Description: Intron_maturas2 Location: 1 697228-1 697537 bp Feature: gene Location: 1698030-1698776 bp Ori: QJR74727.1 Feature: domain Description: Toprim_2 Location: 1698399-1698681 bp Feature: domain Description: Toprim_2 Location: 1 698399-1 698681 bp Feature: gene Location: 1699065-1699616 bp Ori: QJR71860.1 Feature: domain Description: dam Location: 1699074-1699608 bp Feature: domain Description: dam Location: 1 699074-1 699608 bp Feature: gene Location: 1733872-1735764 bp Ori: QJR71884.1 Feature: domain Description: SusD-like_3 Location: 1734226-1734583 bp Feature: domain Description: SusD-like_3 Location: 1 734226-1 734583 bp Feature: domain Description: SusD_RagB Location: 1734925-1735762 bp Feature: domain Description: SusD_RagB Location: 1 734925-1 735762 bp Feature: gene Location: 1735820-1736569 bp Ori: QJR74730.1 Feature: domain Description: GDPD_like_2 Location: 1735877-1736534 bp Feature: domain Description: GDPD_like_2 Location: 1 735877-1 736534 bp Feature: gene Location: 1737514-1737891 bp Ori: QJR71885.1 Feature: domain Description: RVT_N Location: 1737517-1737742 bp Feature: domain Description: RVT_N Location: 1 73751 7-1 737742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1737796-1737865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 737796-1 737865 bp Feature: gene Location: 1737869-1738066 bp Ori: QJR71886.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1737872-1738064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 737872-1 738064 bp Feature: gene Location: 1738187-1738477 bp Ori: QJR71887.1 Feature: domain Description: HTH_28 Location: 1738211-1738358 bp Feature: domain Description: HTH_28 Location: 1 73821 1 -1 738358 bp Feature: gene Location: 1738621-1738809 bp Feature: gene Location: 1768946-1769116 bp Ori: QJR71909.1 Feature: domain Description: DUF3875 Location: 1768955-1769111 bp Feature: domain Description: DUF3875 Location: 1 768955-1 7691 1 1 bp Feature: gene Location: 1769135-1770976 bp Ori: QJR71910.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1769138-1770971 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 7691 38-1 770971 bp Feature: gene Location: 1771600-1773255 bp Ori: QJR71911.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1771654-1771897 bp Feature: domain Description: RVT_N Location: 1 771 654-1 771 897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1771942-1772590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 771 942-1 772590 bp Feature: domain Description: GIIM Note: maturase Location: 1772641-1772875 bp Feature: domain Description: GIIM Note: maturase Location: 1 772641 -1 772875 bp Feature: gene Location: 1773393-1773668 bp Ori: QJR74735.1 Feature: domain Description: Bac_Flav_CT_G Location: 1773396-1773666 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 773396-1 773666 bp Feature: gene Location: 1773675-1773848 bp Ori: QJR71912.1 Feature: domain Description: Bac_Flav_CT_G Location: 1773678-1773834 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 773678-1 773834 bp Feature: gene Location: 3267543-3267953 bp Ori: QJR73089.1 Feature: domain Description: PRK05182 Location: 3267609-3267762 bp Feature: domain Description: PRK051 82 Location: 3267609-3267762 bp Feature: gene Location: 3267977-3268642 bp Ori: QJR73090.1 Feature: domain Description: Bac_Flav_CT_G Location: 3268094-3268520 bp Feature: domain Description: Bac_Flav_CT_G Location: 3268094-3268520 bp Feature: gene Location: 3268645-3270300 bp Ori: QJR73091.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3268699-3268942 bp Feature: domain Description: RVT_N Location: 3268699-3268942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3268987-3269635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3268987-3269635 bp Feature: domain Description: GIIM Note: maturase Location: 3269686-3269920 bp Feature: domain Description: GIIM Note: maturase Location: 3269686-3269920 bp Feature: gene Location: 3270930-3273083 bp Feature: domain Description: Bac_Flav_CT_G Location: 3271077-3272583 bp Feature: domain Description: Bac_Flav_CT_G Location: 3271 077-3272583 bp Feature: domain Description: Bac_Flav_CT_G Location: 3272688-3273084 bp Feature: domain Description: Bac_Flav_CT_G Location: 3272688-3273084 bp Feature: gene Location: 3273190-3273486 bp Ori: QJR73092.1 Feature: domain Description: DUF4133 Location: 3273232-3273409 bp Feature: domain Description: DUF41 33 Location: 3273232-3273409 bp Feature: gene Location: 3280286-3280480 bp Feature: gene Location: 3280582-3280887 bp Feature: gene Location: 3281213-3282874 bp Ori: QJR73104.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3281267-3281510 bp Feature: domain Description: RVT_N Location: 3281 267-3281 51 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3281555-3282203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3281 555-3282203 bp Feature: domain Description: GIIM Note: maturase Location: 3282254-3282488 bp Feature: domain Description: GIIM Note: maturase Location: 3282254-3282488 bp Feature: gene Location: 3283512-3283883 bp Ori: QJR73105.1 Feature: domain Description: COG2865 Location: 3283596-3283860 bp Feature: domain Description: COG2865 Location: 3283596-3283860 bp Feature: gene Location: 3283945-3285508 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3284482-3284659 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3284482-3284659 bp Feature: gene Location: 3453079-3453351 bp Ori: QJR73244.1 Feature: domain Description: DUF3876 Location: 3453112-3453337 bp Feature: domain Description: DUF3876 Location: 34531 1 2-3453337 bp Feature: gene Location: 3453435-3453771 bp Feature: domain Description: DUF4141 Location: 3453462-3453609 bp Feature: domain Description: DUF41 41 Location: 3453462-3453609 bp Feature: gene Location: 3454219-3456024 bp Ori: QJR73245.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3454483-3455305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3454483-3455305 bp Feature: domain Description: matK Location: 3455482-3455695 bp Feature: domain Description: matK Location: 3455482-3455695 bp Feature: domain Description: HNHc Note: nucleases Location: 3455857-3455998 bp Feature: domain Description: HNHc Note: nucleases Location: 3455857-3455998 bp Feature: gene Location: 3456017-3456553 bp Feature: gene Location: 3456555-3457562 bp Ori: QJR73247.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 3456576-3457539 bp Feature: domain Description: Bac_Flav_CT_J Location: 3456576-3457539 bp Feature: gene Location: 3470396-3471625 bp Ori: QJR73265.1 Feature: domain Description: Arm-DNA-bind_5 Location: 3470429-3470672 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3470429-3470672 bp Feature: domain Description: Phage_int_SAM_5 Location: 3470780-3471014 bp Feature: domain Description: Phage_int_SAM_5 Location: 3470780-3471 01 4 bp Feature: domain Description: INTN1_C_like Location: 3471086-3471566 bp Feature: domain Description: INTN1 _C_like Location: 3471 086-3471 566 bp Feature: gene Location: 3471645-3472862 bp Ori: QJR73266.1 Feature: domain Description: Arm-DNA-bind_5 Location: 3471672-3471885 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3471 672-3471 885 bp Feature: domain Description: Phage_int_SAM_5 Location: 3472005-3472257 bp Feature: domain Description: Phage_int_SAM_5 Location: 3472005-3472257 bp Feature: domain Description: INTN1_C_like Location: 3472311-3472788 bp Feature: domain Description: INTN1 _C_like Location: 347231 1 -3472788 bp Feature: gene Location: 3474006-3476267 bp Ori: QJR73267.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3474618-3475074 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 347461 8-3475074 bp Feature: gene Location: 3476258-3477700 bp Ori: QJR73268.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3476735-3477251 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3476735-3477251 bp Feature: gene Location: 3477930-3478238 bp Ori: QJR73269.1 Feature: domain Description: HTH_17 Location: 3478074-3478218 bp Feature: domain Description: HTH_1 7 Location: 3478074-347821 8 bp Feature: gene Location: 3478250-3478582 bp Ori: QJR73270.1 Feature: domain Description: HTH_17 Location: 3478370-3478502 bp Feature: domain Description: HTH_1 7 Location: 3478370-3478502 bp Feature: gene Location: 3624702-3625781 bp Ori: QJR73392.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 3624708-3625662 bp Feature: domain Description: Bac_Flav_CT_J Location: 3624708-3625662 bp Feature: gene Location: 3625801-3626340 bp Feature: gene Location: 3626333-3628138 bp Ori: QJR73394.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3626597-3627419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3626597-362741 9 bp Feature: domain Description: matK Location: 3627596-3627809 bp Feature: domain Description: matK Location: 3627596-3627809 bp Feature: domain Description: HNHc Note: nucleases Location: 3627971-3628112 bp Feature: domain Description: HNHc Note: nucleases Location: 3627971 -36281 1 2 bp Feature: gene Location: 3628704-3628913 bp Feature: domain Description: DUF4141 Location: 3628728-3628866 bp Feature: domain Description: DUF41 41 Location: 3628728-3628866 bp Feature: gene Location: 3628940-3629254 bp Ori: QJR73395.1 Feature: domain Description: DUF3876 Location: 3628994-3629243 bp Feature: domain Description: DUF3876 Location: 3628994-3629243 bp Feature: gene Location: 3629269-3629850 bp Ori: QJR73396.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3629386-3629842 bp Feature: domain Description: Bac_Flav_CT_G Location: 3629386-3629842 bp Feature: gene Location: 3629853-3631508 bp Ori: QJR73397.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3629907-3630150 bp Feature: domain Description: RVT_N Location: 3629907-36301 50 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3630195-3630843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36301 95-3630843 bp Feature: domain Description: GIIM Note: maturase Location: 3630894-3631128 bp Feature: domain Description: GIIM Note: maturase Location: 3630894-3631 1 28 bp Feature: gene Location: 3632138-3634165 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3632141-3634166 bp Feature: domain Description: Bac_Flav_CT_G Location: 36321 41 -36341 66 bp Feature: gene Location: 3634162-3634497 bp Ori: QJR73398.1 Feature: domain Description: DUF4133 Location: 3634189-3634456 bp Feature: domain Description: DUF41 33 Location: 36341 89-3634456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), RVT-GII, matK (CHL00002), HNHc (smart00507), DUF4141 (pfam13605), DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), GIIM (pfam08388), DUF4133 (pfam13571)
DUF4134 (pfam13572), Mob_Pre (pfam01076), Toprim_2 (pfam13155), Intron_maturas2 (pfam01348), dnaG (TIGR01391), AAA_25 (pfam13481), DUF4099 (pfam13351), DUF3945 (pfam13101), NlpD (COG0739), dam (TIGR00571)
SusD-like_3 (pfam14322), SusD_RagB (pfam07980), GDPD_like_2 (cd08582), HTH_28 (pfam13518), DUF3875 (pfam12991), PRK05182 (DNA-directed RNA polymerase subunit alpha; Provisional), COG2865 (Predicted transcriptional regulator, contains HTH domain ), DDE_Tnp_IS66 (pfam03050), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102)
INTN1_C_like (cd01185), RVT-UG8, RVT-UG3, HTH_17 (pfam12728)