myRT

myRT report for GCA_013009875.1_ASM1300987v1

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Seq: CP046425.1 Bacteroides dorei strain JR02 chromosome, complete genome (5515594 bp)
Overview 1 RT 1: 696749-708987 bp 2 RT 2: 1235982-1241889 bp 3 RT 3: 1255445-1265179 bp 4 RT 4: 1414173-1420049 bp 5 RT 5: 1573183-1579287 bp 6 RT 6: 1613551-1618488 bp 7 RT 7: 1648624-1653512 bp 8 RT 8: 3151135-3157001 bp 9 RT 9: 3163878-3168251 bp 10 RT 10: 3336672-3341132 bp 11 RT 11: 3353989-3362095 bp 12 RT 12: 3508295-3518049 bp 13 RT 13: 5028237-5041714 bp Neighborhood of RT #1 [696749, 709031] Bac_Flav_CT_J RVT-GII matK HNHc RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #2 [1235982, 1242359] Mob_Pre Toprim_2 RVT-GII Intron_maturas2 dnaG AAA_25 Neighborhood of RT #3 [1255445, 1265226] Bac_Flav_CT_J RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #4 [1414173, 1420519] Toprim_2 RVT-GII Intron_maturas2 AAA_25 Neighborhood of RT #5 [1573183, 1579295] DUF4099 DUF3945 NlpD RVT-GII Intron_maturas2 Toprim_2 dam Neighborhood of RT #6 [1613551, 1618488] SusD-like_3 SusD_RagB GDPD_like_2 RVT_N RVT-GII RVT-GII HTH_28 Neighborhood of RT #7 [1648624, 1653526] DUF3875 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Bac_Flav_CT_G Neighborhood of RT #8 [3151135, 3157078] PRK05182 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Bac_Flav_CT_G DUF4133 Neighborhood of RT #9 [3163878, 3169100] RVT_N RVT-GII GIIM COG2865 DDE_Tnp_IS66 Neighborhood of RT #10 [3336672, 3341155] DUF3876 DUF4141 RVT-GII matK HNHc Bac_Flav_CT_J Neighborhood of RT #11 [3353989, 3362175] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-UG8 RVT-UG3 HTH_17 HTH_17 Neighborhood of RT #12 [3508295, 3518090] Bac_Flav_CT_J RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #13 [5028237, 5041743] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 DUF4141 RVT-GII matK HNHc Bac_Flav_CT_J Feature: gene Location: 696749-697753 bp Ori: QJR66905.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 696758-697724 bp Feature: domain Description: Bac_Flav_CT_J Location: 696758-697724 bp Feature: gene Location: 697757-698293 bp Feature: gene Location: 698286-700091 bp Ori: QJR66906.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698550-699372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698550-699372 bp Feature: domain Description: matK Location: 699549-699762 bp Feature: domain Description: matK Location: 699549-699762 bp Feature: domain Description: HNHc Note: nucleases Location: 699924-700065 bp Feature: domain Description: HNHc Note: nucleases Location: 699924-700065 bp Feature: gene Location: 700441-700602 bp Feature: gene Location: 700645-700776 bp Feature: gene Location: 700769-702574 bp Ori: QJR66908.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701033-701855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701 033-701 855 bp Feature: domain Description: matK Location: 702032-702245 bp Feature: domain Description: matK Location: 702032-702245 bp Feature: domain Description: HNHc Note: nucleases Location: 702407-702548 bp Feature: domain Description: HNHc Note: nucleases Location: 702407-702548 bp Feature: gene Location: 703125-703352 bp Ori: QJR66909.1 Feature: domain Description: DUF4141 Location: 703137-703293 bp Feature: domain Description: DUF41 41 Location: 7031 37-703293 bp Feature: gene Location: 703376-703756 bp Ori: QJR66910.1 Feature: domain Description: DUF3876 Location: 703457-703721 bp Feature: domain Description: DUF3876 Location: 703457-703721 bp Feature: gene Location: 703797-704387 bp Ori: QJR66911.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 703914-704370 bp Feature: domain Description: Bac_Flav_CT_G Location: 70391 4-704370 bp Feature: gene Location: 704390-706045 bp Ori: QJR66912.1 Gene: ltrA Feature: domain Description: RVT_N Location: 704444-704687 bp Feature: domain Description: RVT_N Location: 704444-704687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 704732-705380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 704732-705380 bp Feature: domain Description: GIIM Note: maturase Location: 705431-705665 bp Feature: domain Description: GIIM Note: maturase Location: 705431 -705665 bp Feature: gene Location: 706669-708702 bp Ori: QJR66913.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 706672-708697 bp Feature: domain Description: Bac_Flav_CT_G Location: 706672-708697 bp Feature: gene Location: 708699-709031 bp Ori: QJR66914.1 Feature: domain Description: DUF4133 Location: 708717-708987 bp Feature: domain Description: DUF41 33 Location: 70871 7-708987 bp Feature: gene Location: 1235982-1237322 bp Ori: QJR67269.1 Feature: domain Description: Mob_Pre Location: 1235988-1236618 bp Feature: domain Description: Mob_Pre Location: 1 235988-1 23661 8 bp Feature: gene Location: 1237506-1238429 bp Ori: QJR70450.1 Feature: domain Description: Toprim_2 Location: 1238037-1238319 bp Feature: domain Description: Toprim_2 Location: 1 238037-1 23831 9 bp Feature: gene Location: 1238419-1240227 bp Ori: QJR67270.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238683-1239505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 238683-1 239505 bp Feature: domain Description: Intron_maturas2 Location: 1239574-1239883 bp Feature: domain Description: Intron_maturas2 Location: 1 239574-1 239883 bp Feature: gene Location: 1240790-1240957 bp Feature: domain Description: dnaG Location: 1240859-1240958 bp Feature: domain Description: dnaG Location: 1 240859-1 240958 bp Feature: gene Location: 1241286-1242359 bp Ori: QJR67271.1 Feature: domain Description: AAA_25 Location: 1241424-1241889 bp Feature: domain Description: AAA_25 Location: 1 241 424-1 241 889 bp Feature: gene Location: 1255445-1256470 bp Ori: QJR67287.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 1255463-1256429 bp Feature: domain Description: Bac_Flav_CT_J Location: 1 255463-1 256429 bp Feature: gene Location: 1256490-1257026 bp Feature: gene Location: 1257019-1258824 bp Ori: QJR67289.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1257283-1258105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 257283-1 2581 05 bp Feature: domain Description: matK Location: 1258282-1258495 bp Feature: domain Description: matK Location: 1 258282-1 258495 bp Feature: domain Description: HNHc Note: nucleases Location: 1258657-1258798 bp Feature: domain Description: HNHc Note: nucleases Location: 1 258657-1 258798 bp Feature: gene Location: 1259375-1259602 bp Ori: QJR67290.1 Feature: domain Description: DUF4141 Location: 1259387-1259543 bp Feature: domain Description: DUF41 41 Location: 1 259387-1 259543 bp Feature: gene Location: 1259607-1259963 bp Ori: QJR67291.1 Feature: domain Description: DUF3876 Location: 1259670-1259940 bp Feature: domain Description: DUF3876 Location: 1 259670-1 259940 bp Feature: gene Location: 1259992-1260585 bp Ori: QJR67292.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1260109-1260568 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 2601 09-1 260568 bp Feature: gene Location: 1260588-1262243 bp Ori: QJR67293.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1260642-1260885 bp Feature: domain Description: RVT_N Location: 1 260642-1 260885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1260930-1261578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 260930-1 261 578 bp Feature: domain Description: GIIM Note: maturase Location: 1261629-1261863 bp Feature: domain Description: GIIM Note: maturase Location: 1 261 629-1 261 863 bp Feature: gene Location: 1262873-1264897 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1262876-1264898 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 262876-1 264898 bp Feature: gene Location: 1264894-1265226 bp Ori: QJR67294.1 Feature: domain Description: DUF4133 Location: 1264912-1265179 bp Feature: domain Description: DUF41 33 Location: 1 26491 2-1 2651 79 bp Feature: gene Location: 1414173-1415576 bp Feature: gene Location: 1415791-1416702 bp Ori: QJR70455.1 Feature: domain Description: Toprim_2 Location: 1416325-1416613 bp Feature: domain Description: Toprim_2 Location: 1 41 6325-1 41 661 3 bp Feature: gene Location: 1416692-1418500 bp Ori: QJR67400.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1416956-1417778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 6956-1 41 7778 bp Feature: domain Description: Intron_maturas2 Location: 1417847-1418156 bp Feature: domain Description: Intron_maturas2 Location: 1 41 7847-1 41 81 56 bp Feature: gene Location: 1419063-1419230 bp Feature: gene Location: 1419443-1420519 bp Ori: QJR70456.1 Feature: domain Description: AAA_25 Location: 1419587-1420049 bp Feature: domain Description: AAA_25 Location: 1 41 9587-1 420049 bp Feature: gene Location: 1573183-1574322 bp Ori: QJR67521.1 Feature: domain Description: DUF4099 Location: 1573561-1573801 bp Feature: domain Description: DUF4099 Location: 1 573561 -1 573801 bp Feature: domain Description: DUF3945 Location: 1573912-1574083 bp Feature: domain Description: DUF3945 Location: 1 57391 2-1 574083 bp Feature: gene Location: 1574646-1575005 bp Ori: QJR70464.1 Feature: domain Description: NlpD Location: 1574652-1574970 bp Feature: domain Description: NlpD Location: 1 574652-1 574970 bp Feature: gene Location: 1575752-1577560 bp Ori: QJR67522.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1576016-1576838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 57601 6-1 576838 bp Feature: domain Description: Intron_maturas2 Location: 1576907-1577216 bp Feature: domain Description: Intron_maturas2 Location: 1 576907-1 57721 6 bp Feature: gene Location: 1577709-1578455 bp Ori: QJR70465.1 Feature: domain Description: Toprim_2 Location: 1578078-1578360 bp Feature: domain Description: Toprim_2 Location: 1 578078-1 578360 bp Feature: gene Location: 1578744-1579295 bp Ori: QJR67523.1 Feature: domain Description: dam Location: 1578753-1579287 bp Feature: domain Description: dam Location: 1 578753-1 579287 bp Feature: gene Location: 1613551-1615443 bp Ori: QJR67547.1 Feature: domain Description: SusD-like_3 Location: 1613905-1614262 bp Feature: domain Description: SusD-like_3 Location: 1 61 3905-1 61 4262 bp Feature: domain Description: SusD_RagB Location: 1614604-1615441 bp Feature: domain Description: SusD_RagB Location: 1 61 4604-1 61 5441 bp Feature: gene Location: 1615499-1616248 bp Ori: QJR70468.1 Feature: domain Description: GDPD_like_2 Location: 1615556-1616213 bp Feature: domain Description: GDPD_like_2 Location: 1 61 5556-1 61 621 3 bp Feature: gene Location: 1617193-1617570 bp Ori: QJR67548.1 Feature: domain Description: RVT_N Location: 1617196-1617421 bp Feature: domain Description: RVT_N Location: 1 61 71 96-1 61 7421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617475-1617544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 7475-1 61 7544 bp Feature: gene Location: 1617548-1617745 bp Ori: QJR67549.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617551-1617743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 7551 -1 61 7743 bp Feature: gene Location: 1617866-1618156 bp Ori: QJR67550.1 Feature: domain Description: HTH_28 Location: 1617890-1618037 bp Feature: domain Description: HTH_28 Location: 1 61 7890-1 61 8037 bp Feature: gene Location: 1618300-1618488 bp Feature: gene Location: 1648624-1648794 bp Ori: QJR67572.1 Feature: domain Description: DUF3875 Location: 1648633-1648789 bp Feature: domain Description: DUF3875 Location: 1 648633-1 648789 bp Feature: gene Location: 1648813-1650654 bp Ori: QJR67573.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1648816-1650649 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 64881 6-1 650649 bp Feature: gene Location: 1651278-1652933 bp Ori: QJR67574.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1651332-1651575 bp Feature: domain Description: RVT_N Location: 1 651 332-1 651 575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1651620-1652268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 651 620-1 652268 bp Feature: domain Description: GIIM Note: maturase Location: 1652319-1652553 bp Feature: domain Description: GIIM Note: maturase Location: 1 65231 9-1 652553 bp Feature: gene Location: 1653071-1653346 bp Ori: QJR70473.1 Feature: domain Description: Bac_Flav_CT_G Location: 1653074-1653344 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 653074-1 653344 bp Feature: gene Location: 1653353-1653526 bp Ori: QJR67575.1 Feature: domain Description: Bac_Flav_CT_G Location: 1653356-1653512 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 653356-1 65351 2 bp Feature: gene Location: 3151135-3151545 bp Ori: QJR68758.1 Feature: domain Description: PRK05182 Location: 3151201-3151354 bp Feature: domain Description: PRK051 82 Location: 31 51 201 -31 51 354 bp Feature: gene Location: 3151569-3152234 bp Ori: QJR68759.1 Feature: domain Description: Bac_Flav_CT_G Location: 3151686-3152112 bp Feature: domain Description: Bac_Flav_CT_G Location: 31 51 686-31 521 1 2 bp Feature: gene Location: 3152237-3153892 bp Ori: QJR68760.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3152291-3152534 bp Feature: domain Description: RVT_N Location: 31 52291 -31 52534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3152579-3153227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 52579-31 53227 bp Feature: domain Description: GIIM Note: maturase Location: 3153278-3153512 bp Feature: domain Description: GIIM Note: maturase Location: 31 53278-31 5351 2 bp Feature: gene Location: 3154522-3156675 bp Feature: domain Description: Bac_Flav_CT_G Location: 3154669-3156175 bp Feature: domain Description: Bac_Flav_CT_G Location: 31 54669-31 561 75 bp Feature: domain Description: Bac_Flav_CT_G Location: 3156280-3156676 bp Feature: domain Description: Bac_Flav_CT_G Location: 31 56280-31 56676 bp Feature: gene Location: 3156782-3157078 bp Ori: QJR68761.1 Feature: domain Description: DUF4133 Location: 3156824-3157001 bp Feature: domain Description: DUF41 33 Location: 31 56824-31 57001 bp Feature: gene Location: 3163878-3164072 bp Feature: gene Location: 3164174-3164479 bp Feature: gene Location: 3164805-3166466 bp Ori: QJR68773.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3164859-3165102 bp Feature: domain Description: RVT_N Location: 31 64859-31 651 02 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3165147-3165795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 651 47-31 65795 bp Feature: domain Description: GIIM Note: maturase Location: 3165846-3166080 bp Feature: domain Description: GIIM Note: maturase Location: 31 65846-31 66080 bp Feature: gene Location: 3167104-3167475 bp Ori: QJR68774.1 Feature: domain Description: COG2865 Location: 3167188-3167452 bp Feature: domain Description: COG2865 Location: 31 671 88-31 67452 bp Feature: gene Location: 3167537-3169100 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3168074-3168251 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 68074-31 68251 bp Feature: gene Location: 3336672-3336944 bp Ori: QJR68914.1 Feature: domain Description: DUF3876 Location: 3336705-3336930 bp Feature: domain Description: DUF3876 Location: 3336705-3336930 bp Feature: gene Location: 3337028-3337364 bp Feature: domain Description: DUF4141 Location: 3337055-3337202 bp Feature: domain Description: DUF41 41 Location: 3337055-3337202 bp Feature: gene Location: 3337812-3339617 bp Ori: QJR68915.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3338076-3338898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3338076-3338898 bp Feature: domain Description: matK Location: 3339075-3339288 bp Feature: domain Description: matK Location: 3339075-3339288 bp Feature: domain Description: HNHc Note: nucleases Location: 3339450-3339591 bp Feature: domain Description: HNHc Note: nucleases Location: 3339450-3339591 bp Feature: gene Location: 3339610-3340146 bp Feature: gene Location: 3340148-3341155 bp Ori: QJR68917.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 3340169-3341132 bp Feature: domain Description: Bac_Flav_CT_J Location: 33401 69-3341 1 32 bp Feature: gene Location: 3353989-3355218 bp Ori: QJR68935.1 Feature: domain Description: Arm-DNA-bind_5 Location: 3354022-3354265 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3354022-3354265 bp Feature: domain Description: Phage_int_SAM_5 Location: 3354373-3354607 bp Feature: domain Description: Phage_int_SAM_5 Location: 3354373-3354607 bp Feature: domain Description: INTN1_C_like Location: 3354679-3355159 bp Feature: domain Description: INTN1 _C_like Location: 3354679-33551 59 bp Feature: gene Location: 3355238-3356455 bp Ori: QJR68936.1 Feature: domain Description: Arm-DNA-bind_5 Location: 3355265-3355478 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3355265-3355478 bp Feature: domain Description: Phage_int_SAM_5 Location: 3355598-3355850 bp Feature: domain Description: Phage_int_SAM_5 Location: 3355598-3355850 bp Feature: domain Description: INTN1_C_like Location: 3355904-3356381 bp Feature: domain Description: INTN1 _C_like Location: 3355904-3356381 bp Feature: gene Location: 3357599-3359860 bp Ori: QJR68937.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3358211-3358667 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 335821 1 -3358667 bp Feature: gene Location: 3359851-3361293 bp Ori: QJR68938.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3360328-3360844 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3360328-3360844 bp Feature: gene Location: 3361523-3361831 bp Ori: QJR68939.1 Feature: domain Description: HTH_17 Location: 3361667-3361811 bp Feature: domain Description: HTH_1 7 Location: 3361 667-3361 81 1 bp Feature: gene Location: 3361843-3362175 bp Ori: QJR68940.1 Feature: domain Description: HTH_17 Location: 3361963-3362095 bp Feature: domain Description: HTH_1 7 Location: 3361 963-3362095 bp Feature: gene Location: 3508295-3509374 bp Ori: QJR69062.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 3508301-3509255 bp Feature: domain Description: Bac_Flav_CT_J Location: 3508301 -3509255 bp Feature: gene Location: 3509394-3509933 bp Feature: gene Location: 3509926-3511731 bp Ori: QJR69064.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3510190-3511012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 01 90-351 1 01 2 bp Feature: domain Description: matK Location: 3511189-3511402 bp Feature: domain Description: matK Location: 351 1 1 89-351 1 402 bp Feature: domain Description: HNHc Note: nucleases Location: 3511564-3511705 bp Feature: domain Description: HNHc Note: nucleases Location: 351 1 564-351 1 705 bp Feature: gene Location: 3512297-3512506 bp Feature: domain Description: DUF4141 Location: 3512321-3512459 bp Feature: domain Description: DUF41 41 Location: 351 2321 -351 2459 bp Feature: gene Location: 3512533-3512847 bp Ori: QJR69065.1 Feature: domain Description: DUF3876 Location: 3512587-3512836 bp Feature: domain Description: DUF3876 Location: 351 2587-351 2836 bp Feature: gene Location: 3512862-3513443 bp Ori: QJR69066.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3512979-3513435 bp Feature: domain Description: Bac_Flav_CT_G Location: 351 2979-351 3435 bp Feature: gene Location: 3513446-3515101 bp Ori: QJR69067.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3513500-3513743 bp Feature: domain Description: RVT_N Location: 351 3500-351 3743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3513788-3514436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 3788-351 4436 bp Feature: domain Description: GIIM Note: maturase Location: 3514487-3514721 bp Feature: domain Description: GIIM Note: maturase Location: 351 4487-351 4721 bp Feature: gene Location: 3515731-3517758 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3515734-3517759 bp Feature: domain Description: Bac_Flav_CT_G Location: 351 5734-351 7759 bp Feature: gene Location: 3517755-3518090 bp Ori: QJR69068.1 Feature: domain Description: DUF4133 Location: 3517782-3518049 bp Feature: domain Description: DUF41 33 Location: 351 7782-351 8049 bp Feature: gene Location: 5028237-5028977 bp Feature: gene Location: 5029179-5029409 bp Ori: QJR70072.1 Feature: domain Description: DUF4134 Location: 5029215-5029395 bp Feature: domain Description: DUF41 34 Location: 502921 5-5029395 bp Feature: gene Location: 5030025-5031680 bp Ori: QJR70073.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5030082-5030319 bp Feature: domain Description: RVT_N Location: 5030082-503031 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5030370-5031018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5030370-5031 01 8 bp Feature: domain Description: GIIM Note: maturase Location: 5031075-5031306 bp Feature: domain Description: GIIM Note: maturase Location: 5031 075-5031 306 bp Feature: gene Location: 5031677-5031919 bp Ori: QJR70074.1 Feature: domain Description: DUF4134 Location: 5031824-5031914 bp Feature: domain Description: DUF41 34 Location: 5031 824-5031 91 4 bp Feature: gene Location: 5031930-5032262 bp Ori: QJR70075.1 Feature: domain Description: DUF4133 Location: 5031948-5032218 bp Feature: domain Description: DUF41 33 Location: 5031 948-503221 8 bp Feature: gene Location: 5032259-5034286 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 5032262-5034287 bp Feature: domain Description: Bac_Flav_CT_G Location: 5032262-5034287 bp Feature: gene Location: 5034916-5036571 bp Ori: QJR70076.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5034970-5035213 bp Feature: domain Description: RVT_N Location: 5034970-503521 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5035258-5035906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5035258-5035906 bp Feature: domain Description: GIIM Note: maturase Location: 5035957-5036191 bp Feature: domain Description: GIIM Note: maturase Location: 5035957-50361 91 bp Feature: gene Location: 5036574-5037164 bp Ori: QJR70077.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 5036691-5037147 bp Feature: domain Description: Bac_Flav_CT_G Location: 5036691 -50371 47 bp Feature: gene Location: 5037209-5037592 bp Ori: QJR70078.1 Feature: domain Description: DUF3876 Location: 5037290-5037554 bp Feature: domain Description: DUF3876 Location: 5037290-5037554 bp Feature: gene Location: 5037623-5037850 bp Ori: QJR70079.1 Feature: domain Description: DUF4141 Location: 5037635-5037791 bp Feature: domain Description: DUF41 41 Location: 5037635-5037791 bp Feature: gene Location: 5038401-5040206 bp Ori: QJR70080.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5038665-5039487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5038665-5039487 bp Feature: domain Description: matK Location: 5039664-5039877 bp Feature: domain Description: matK Location: 5039664-5039877 bp Feature: domain Description: HNHc Note: nucleases Location: 5040039-5040180 bp Feature: domain Description: HNHc Note: nucleases Location: 5040039-50401 80 bp Feature: gene Location: 5040199-5040735 bp Feature: gene Location: 5040739-5041743 bp Ori: QJR70081.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 5040745-5041714 bp Feature: domain Description: Bac_Flav_CT_J Location: 5040745-5041 71 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), RVT-GII, matK (CHL00002), HNHc (smart00507), DUF4141 (pfam13605), DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), GIIM (pfam08388), DUF4133 (pfam13571)
Mob_Pre (pfam01076), Toprim_2 (pfam13155), Intron_maturas2 (pfam01348), dnaG (TIGR01391), AAA_25 (pfam13481), DUF4099 (pfam13351), DUF3945 (pfam13101), NlpD (COG0739), dam (TIGR00571), SusD-like_3 (pfam14322)
SusD_RagB (pfam07980), GDPD_like_2 (cd08582), HTH_28 (pfam13518), DUF3875 (pfam12991), PRK05182 (DNA-directed RNA polymerase subunit alpha; Provisional), COG2865 (Predicted transcriptional regulator, contains HTH domain ), DDE_Tnp_IS66 (pfam03050), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)
RVT-UG8, RVT-UG3, HTH_17 (pfam12728), DUF4134 (pfam13572)