myRT

myRT report for GCA_013010095.1_ASM1301009v1

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Seq: CP046426.1 Bacteroides dorei strain JR03 chromosome, complete genome (5510617 bp)
Overview 1 RT 1: 695716-707954 bp 2 RT 2: 1234948-1240855 bp 3 RT 3: 1254411-1264145 bp 4 RT 4: 1413139-1419015 bp 5 RT 5: 1572149-1578253 bp 6 RT 6: 1612517-1617454 bp 7 RT 7: 1647591-1652479 bp 8 RT 8: 3146190-3152056 bp 9 RT 9: 3158933-3163306 bp 10 RT 10: 3331727-3336187 bp 11 RT 11: 3349044-3357150 bp 12 RT 12: 3503350-3513104 bp 13 RT 13: 5023295-5036772 bp Neighborhood of RT #1 [695716, 707998] Bac_Flav_CT_J RVT-GII matK HNHc RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #2 [1234948, 1241325] Mob_Pre Toprim_2 RVT-GII Intron_maturas2 dnaG AAA_25 Neighborhood of RT #3 [1254411, 1264192] Bac_Flav_CT_J RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #4 [1413139, 1419485] Toprim_2 RVT-GII Intron_maturas2 AAA_25 Neighborhood of RT #5 [1572149, 1578261] DUF4099 DUF3945 NlpD RVT-GII Intron_maturas2 Toprim_2 dam Neighborhood of RT #6 [1612517, 1617454] SusD-like_3 SusD_RagB GDPD_like_2 RVT_N RVT-GII RVT-GII HTH_28 Neighborhood of RT #7 [1647591, 1652493] DUF3875 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Bac_Flav_CT_G Neighborhood of RT #8 [3146190, 3152133] PRK05182 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Bac_Flav_CT_G DUF4133 Neighborhood of RT #9 [3158933, 3164155] RVT_N RVT-GII GIIM COG2865 DDE_Tnp_IS66 Neighborhood of RT #10 [3331727, 3336210] DUF3876 DUF4141 RVT-GII matK HNHc Bac_Flav_CT_J Neighborhood of RT #11 [3349044, 3357230] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-UG8 RVT-UG3 HTH_17 HTH_17 Neighborhood of RT #12 [3503350, 3513145] Bac_Flav_CT_J RVT-GII matK HNHc DUF4141 DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #13 [5023295, 5036801] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 DUF4141 RVT-GII matK HNHc Bac_Flav_CT_J Feature: gene Location: 695716-696720 bp Ori: QJR62647.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 695725-696691 bp Feature: domain Description: Bac_Flav_CT_J Location: 695725-696691 bp Feature: gene Location: 696724-697260 bp Feature: gene Location: 697253-699058 bp Ori: QJR62648.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 697517-698339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69751 7-698339 bp Feature: domain Description: matK Location: 698516-698729 bp Feature: domain Description: matK Location: 69851 6-698729 bp Feature: domain Description: HNHc Note: nucleases Location: 698891-699032 bp Feature: domain Description: HNHc Note: nucleases Location: 698891 -699032 bp Feature: gene Location: 699408-699569 bp Feature: gene Location: 699612-699743 bp Feature: gene Location: 699736-701541 bp Ori: QJR62650.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700000-700822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700000-700822 bp Feature: domain Description: matK Location: 700999-701212 bp Feature: domain Description: matK Location: 700999-701 21 2 bp Feature: domain Description: HNHc Note: nucleases Location: 701374-701515 bp Feature: domain Description: HNHc Note: nucleases Location: 701 374-701 51 5 bp Feature: gene Location: 702092-702319 bp Ori: QJR62651.1 Feature: domain Description: DUF4141 Location: 702104-702260 bp Feature: domain Description: DUF41 41 Location: 7021 04-702260 bp Feature: gene Location: 702343-702723 bp Ori: QJR62652.1 Feature: domain Description: DUF3876 Location: 702424-702688 bp Feature: domain Description: DUF3876 Location: 702424-702688 bp Feature: gene Location: 702764-703354 bp Ori: QJR62653.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 702881-703337 bp Feature: domain Description: Bac_Flav_CT_G Location: 702881 -703337 bp Feature: gene Location: 703357-705012 bp Ori: QJR62654.1 Gene: ltrA Feature: domain Description: RVT_N Location: 703411-703654 bp Feature: domain Description: RVT_N Location: 70341 1 -703654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703699-704347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703699-704347 bp Feature: domain Description: GIIM Note: maturase Location: 704398-704632 bp Feature: domain Description: GIIM Note: maturase Location: 704398-704632 bp Feature: gene Location: 705636-707669 bp Ori: QJR62655.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 705639-707664 bp Feature: domain Description: Bac_Flav_CT_G Location: 705639-707664 bp Feature: gene Location: 707666-707998 bp Ori: QJR62656.1 Feature: domain Description: DUF4133 Location: 707684-707954 bp Feature: domain Description: DUF41 33 Location: 707684-707954 bp Feature: gene Location: 1234948-1236288 bp Ori: QJR63009.1 Feature: domain Description: Mob_Pre Location: 1234954-1235584 bp Feature: domain Description: Mob_Pre Location: 1 234954-1 235584 bp Feature: gene Location: 1236472-1237395 bp Ori: QJR66188.1 Feature: domain Description: Toprim_2 Location: 1237003-1237285 bp Feature: domain Description: Toprim_2 Location: 1 237003-1 237285 bp Feature: gene Location: 1237385-1239193 bp Ori: QJR63010.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1237649-1238471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 237649-1 238471 bp Feature: domain Description: Intron_maturas2 Location: 1238540-1238849 bp Feature: domain Description: Intron_maturas2 Location: 1 238540-1 238849 bp Feature: gene Location: 1239756-1239923 bp Feature: domain Description: dnaG Location: 1239825-1239924 bp Feature: domain Description: dnaG Location: 1 239825-1 239924 bp Feature: gene Location: 1240252-1241325 bp Ori: QJR63011.1 Feature: domain Description: AAA_25 Location: 1240390-1240855 bp Feature: domain Description: AAA_25 Location: 1 240390-1 240855 bp Feature: gene Location: 1254411-1255436 bp Ori: QJR63027.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 1254429-1255395 bp Feature: domain Description: Bac_Flav_CT_J Location: 1 254429-1 255395 bp Feature: gene Location: 1255456-1255992 bp Feature: gene Location: 1255985-1257790 bp Ori: QJR63029.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1256249-1257071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 256249-1 257071 bp Feature: domain Description: matK Location: 1257248-1257461 bp Feature: domain Description: matK Location: 1 257248-1 257461 bp Feature: domain Description: HNHc Note: nucleases Location: 1257623-1257764 bp Feature: domain Description: HNHc Note: nucleases Location: 1 257623-1 257764 bp Feature: gene Location: 1258341-1258568 bp Ori: QJR63030.1 Feature: domain Description: DUF4141 Location: 1258353-1258509 bp Feature: domain Description: DUF41 41 Location: 1 258353-1 258509 bp Feature: gene Location: 1258573-1258929 bp Ori: QJR63031.1 Feature: domain Description: DUF3876 Location: 1258636-1258906 bp Feature: domain Description: DUF3876 Location: 1 258636-1 258906 bp Feature: gene Location: 1258958-1259551 bp Ori: QJR63032.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1259075-1259534 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 259075-1 259534 bp Feature: gene Location: 1259554-1261209 bp Ori: QJR63033.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1259608-1259851 bp Feature: domain Description: RVT_N Location: 1 259608-1 259851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1259896-1260544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 259896-1 260544 bp Feature: domain Description: GIIM Note: maturase Location: 1260595-1260829 bp Feature: domain Description: GIIM Note: maturase Location: 1 260595-1 260829 bp Feature: gene Location: 1261839-1263863 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1261842-1263864 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 261 842-1 263864 bp Feature: gene Location: 1263860-1264192 bp Ori: QJR63034.1 Feature: domain Description: DUF4133 Location: 1263878-1264145 bp Feature: domain Description: DUF41 33 Location: 1 263878-1 2641 45 bp Feature: gene Location: 1413139-1414542 bp Feature: gene Location: 1414757-1415668 bp Ori: QJR66194.1 Feature: domain Description: Toprim_2 Location: 1415291-1415579 bp Feature: domain Description: Toprim_2 Location: 1 41 5291 -1 41 5579 bp Feature: gene Location: 1415658-1417466 bp Ori: QJR63139.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1415922-1416744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 5922-1 41 6744 bp Feature: domain Description: Intron_maturas2 Location: 1416813-1417122 bp Feature: domain Description: Intron_maturas2 Location: 1 41 681 3-1 41 71 22 bp Feature: gene Location: 1418029-1418196 bp Feature: gene Location: 1418409-1419485 bp Ori: QJR66195.1 Feature: domain Description: AAA_25 Location: 1418553-1419015 bp Feature: domain Description: AAA_25 Location: 1 41 8553-1 41 901 5 bp Feature: gene Location: 1572149-1573288 bp Ori: QJR63260.1 Feature: domain Description: DUF4099 Location: 1572527-1572767 bp Feature: domain Description: DUF4099 Location: 1 572527-1 572767 bp Feature: domain Description: DUF3945 Location: 1572878-1573049 bp Feature: domain Description: DUF3945 Location: 1 572878-1 573049 bp Feature: gene Location: 1573612-1573971 bp Ori: QJR66203.1 Feature: domain Description: NlpD Location: 1573618-1573936 bp Feature: domain Description: NlpD Location: 1 57361 8-1 573936 bp Feature: gene Location: 1574718-1576526 bp Ori: QJR63261.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1574982-1575804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 574982-1 575804 bp Feature: domain Description: Intron_maturas2 Location: 1575873-1576182 bp Feature: domain Description: Intron_maturas2 Location: 1 575873-1 5761 82 bp Feature: gene Location: 1576675-1577421 bp Ori: QJR66204.1 Feature: domain Description: Toprim_2 Location: 1577044-1577326 bp Feature: domain Description: Toprim_2 Location: 1 577044-1 577326 bp Feature: gene Location: 1577710-1578261 bp Ori: QJR63262.1 Feature: domain Description: dam Location: 1577719-1578253 bp Feature: domain Description: dam Location: 1 57771 9-1 578253 bp Feature: gene Location: 1612517-1614409 bp Ori: QJR63286.1 Feature: domain Description: SusD-like_3 Location: 1612871-1613228 bp Feature: domain Description: SusD-like_3 Location: 1 61 2871 -1 61 3228 bp Feature: domain Description: SusD_RagB Location: 1613570-1614407 bp Feature: domain Description: SusD_RagB Location: 1 61 3570-1 61 4407 bp Feature: gene Location: 1614465-1615214 bp Ori: QJR66207.1 Feature: domain Description: GDPD_like_2 Location: 1614522-1615179 bp Feature: domain Description: GDPD_like_2 Location: 1 61 4522-1 61 51 79 bp Feature: gene Location: 1616159-1616536 bp Ori: QJR63287.1 Feature: domain Description: RVT_N Location: 1616162-1616387 bp Feature: domain Description: RVT_N Location: 1 61 61 62-1 61 6387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1616441-1616510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 6441 -1 61 651 0 bp Feature: gene Location: 1616514-1616711 bp Ori: QJR63288.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1616517-1616709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 651 7-1 61 6709 bp Feature: gene Location: 1616832-1617122 bp Ori: QJR63289.1 Feature: domain Description: HTH_28 Location: 1616856-1617003 bp Feature: domain Description: HTH_28 Location: 1 61 6856-1 61 7003 bp Feature: gene Location: 1617266-1617454 bp Feature: gene Location: 1647591-1647761 bp Ori: QJR63311.1 Feature: domain Description: DUF3875 Location: 1647600-1647756 bp Feature: domain Description: DUF3875 Location: 1 647600-1 647756 bp Feature: gene Location: 1647780-1649621 bp Ori: QJR63312.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1647783-1649616 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 647783-1 64961 6 bp Feature: gene Location: 1650245-1651900 bp Ori: QJR63313.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1650299-1650542 bp Feature: domain Description: RVT_N Location: 1 650299-1 650542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1650587-1651235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 650587-1 651 235 bp Feature: domain Description: GIIM Note: maturase Location: 1651286-1651520 bp Feature: domain Description: GIIM Note: maturase Location: 1 651 286-1 651 520 bp Feature: gene Location: 1652038-1652313 bp Ori: QJR66212.1 Feature: domain Description: Bac_Flav_CT_G Location: 1652041-1652311 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 652041 -1 65231 1 bp Feature: gene Location: 1652320-1652493 bp Ori: QJR63314.1 Feature: domain Description: Bac_Flav_CT_G Location: 1652323-1652479 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 652323-1 652479 bp Feature: gene Location: 3146190-3146600 bp Ori: QJR64492.1 Feature: domain Description: PRK05182 Location: 3146256-3146409 bp Feature: domain Description: PRK051 82 Location: 31 46256-31 46409 bp Feature: gene Location: 3146624-3147289 bp Ori: QJR64493.1 Feature: domain Description: Bac_Flav_CT_G Location: 3146741-3147167 bp Feature: domain Description: Bac_Flav_CT_G Location: 31 46741 -31 471 67 bp Feature: gene Location: 3147292-3148947 bp Ori: QJR64494.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3147346-3147589 bp Feature: domain Description: RVT_N Location: 31 47346-31 47589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3147634-3148282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 47634-31 48282 bp Feature: domain Description: GIIM Note: maturase Location: 3148333-3148567 bp Feature: domain Description: GIIM Note: maturase Location: 31 48333-31 48567 bp Feature: gene Location: 3149577-3151730 bp Feature: domain Description: Bac_Flav_CT_G Location: 3149724-3151230 bp Feature: domain Description: Bac_Flav_CT_G Location: 31 49724-31 51 230 bp Feature: domain Description: Bac_Flav_CT_G Location: 3151335-3151731 bp Feature: domain Description: Bac_Flav_CT_G Location: 31 51 335-31 51 731 bp Feature: gene Location: 3151837-3152133 bp Ori: QJR64495.1 Feature: domain Description: DUF4133 Location: 3151879-3152056 bp Feature: domain Description: DUF41 33 Location: 31 51 879-31 52056 bp Feature: gene Location: 3158933-3159127 bp Feature: gene Location: 3159229-3159534 bp Feature: gene Location: 3159860-3161521 bp Ori: QJR64507.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3159914-3160157 bp Feature: domain Description: RVT_N Location: 31 5991 4-31 601 57 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3160202-3160850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 60202-31 60850 bp Feature: domain Description: GIIM Note: maturase Location: 3160901-3161135 bp Feature: domain Description: GIIM Note: maturase Location: 31 60901 -31 61 1 35 bp Feature: gene Location: 3162159-3162530 bp Ori: QJR64508.1 Feature: domain Description: COG2865 Location: 3162243-3162507 bp Feature: domain Description: COG2865 Location: 31 62243-31 62507 bp Feature: gene Location: 3162592-3164155 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3163129-3163306 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 631 29-31 63306 bp Feature: gene Location: 3331727-3331999 bp Ori: QJR64649.1 Feature: domain Description: DUF3876 Location: 3331760-3331985 bp Feature: domain Description: DUF3876 Location: 3331 760-3331 985 bp Feature: gene Location: 3332083-3332419 bp Feature: domain Description: DUF4141 Location: 3332110-3332257 bp Feature: domain Description: DUF41 41 Location: 33321 1 0-3332257 bp Feature: gene Location: 3332867-3334672 bp Ori: QJR64650.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3333131-3333953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33331 31 -3333953 bp Feature: domain Description: matK Location: 3334130-3334343 bp Feature: domain Description: matK Location: 33341 30-3334343 bp Feature: domain Description: HNHc Note: nucleases Location: 3334505-3334646 bp Feature: domain Description: HNHc Note: nucleases Location: 3334505-3334646 bp Feature: gene Location: 3334665-3335201 bp Feature: gene Location: 3335203-3336210 bp Ori: QJR64652.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 3335224-3336187 bp Feature: domain Description: Bac_Flav_CT_J Location: 3335224-33361 87 bp Feature: gene Location: 3349044-3350273 bp Ori: QJR64670.1 Feature: domain Description: Arm-DNA-bind_5 Location: 3349077-3349320 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3349077-3349320 bp Feature: domain Description: Phage_int_SAM_5 Location: 3349428-3349662 bp Feature: domain Description: Phage_int_SAM_5 Location: 3349428-3349662 bp Feature: domain Description: INTN1_C_like Location: 3349734-3350214 bp Feature: domain Description: INTN1 _C_like Location: 3349734-335021 4 bp Feature: gene Location: 3350293-3351510 bp Ori: QJR64671.1 Feature: domain Description: Arm-DNA-bind_5 Location: 3350320-3350533 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3350320-3350533 bp Feature: domain Description: Phage_int_SAM_5 Location: 3350653-3350905 bp Feature: domain Description: Phage_int_SAM_5 Location: 3350653-3350905 bp Feature: domain Description: INTN1_C_like Location: 3350959-3351436 bp Feature: domain Description: INTN1 _C_like Location: 3350959-3351 436 bp Feature: gene Location: 3352654-3354915 bp Ori: QJR64672.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3353266-3353722 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3353266-3353722 bp Feature: gene Location: 3354906-3356348 bp Ori: QJR64673.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3355383-3355899 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3355383-3355899 bp Feature: gene Location: 3356578-3356886 bp Ori: QJR64674.1 Feature: domain Description: HTH_17 Location: 3356722-3356866 bp Feature: domain Description: HTH_1 7 Location: 3356722-3356866 bp Feature: gene Location: 3356898-3357230 bp Ori: QJR64675.1 Feature: domain Description: HTH_17 Location: 3357018-3357150 bp Feature: domain Description: HTH_1 7 Location: 335701 8-33571 50 bp Feature: gene Location: 3503350-3504429 bp Ori: QJR64797.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 3503356-3504310 bp Feature: domain Description: Bac_Flav_CT_J Location: 3503356-350431 0 bp Feature: gene Location: 3504449-3504988 bp Feature: gene Location: 3504981-3506786 bp Ori: QJR64799.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3505245-3506067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3505245-3506067 bp Feature: domain Description: matK Location: 3506244-3506457 bp Feature: domain Description: matK Location: 3506244-3506457 bp Feature: domain Description: HNHc Note: nucleases Location: 3506619-3506760 bp Feature: domain Description: HNHc Note: nucleases Location: 350661 9-3506760 bp Feature: gene Location: 3507352-3507561 bp Feature: domain Description: DUF4141 Location: 3507376-3507514 bp Feature: domain Description: DUF41 41 Location: 3507376-350751 4 bp Feature: gene Location: 3507588-3507902 bp Ori: QJR64800.1 Feature: domain Description: DUF3876 Location: 3507642-3507891 bp Feature: domain Description: DUF3876 Location: 3507642-3507891 bp Feature: gene Location: 3507917-3508498 bp Ori: QJR64801.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3508034-3508490 bp Feature: domain Description: Bac_Flav_CT_G Location: 3508034-3508490 bp Feature: gene Location: 3508501-3510156 bp Ori: QJR64802.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3508555-3508798 bp Feature: domain Description: RVT_N Location: 3508555-3508798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3508843-3509491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3508843-3509491 bp Feature: domain Description: GIIM Note: maturase Location: 3509542-3509776 bp Feature: domain Description: GIIM Note: maturase Location: 3509542-3509776 bp Feature: gene Location: 3510786-3512813 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 3510789-3512814 bp Feature: domain Description: Bac_Flav_CT_G Location: 351 0789-351 281 4 bp Feature: gene Location: 3512810-3513145 bp Ori: QJR64803.1 Feature: domain Description: DUF4133 Location: 3512837-3513104 bp Feature: domain Description: DUF41 33 Location: 351 2837-351 31 04 bp Feature: gene Location: 5023295-5024035 bp Feature: gene Location: 5024237-5024467 bp Ori: QJR65810.1 Feature: domain Description: DUF4134 Location: 5024273-5024453 bp Feature: domain Description: DUF41 34 Location: 5024273-5024453 bp Feature: gene Location: 5025083-5026738 bp Ori: QJR65811.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5025140-5025377 bp Feature: domain Description: RVT_N Location: 50251 40-5025377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5025428-5026076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5025428-5026076 bp Feature: domain Description: GIIM Note: maturase Location: 5026133-5026364 bp Feature: domain Description: GIIM Note: maturase Location: 50261 33-5026364 bp Feature: gene Location: 5026735-5026977 bp Ori: QJR65812.1 Feature: domain Description: DUF4134 Location: 5026882-5026972 bp Feature: domain Description: DUF41 34 Location: 5026882-5026972 bp Feature: gene Location: 5026988-5027320 bp Ori: QJR65813.1 Feature: domain Description: DUF4133 Location: 5027006-5027276 bp Feature: domain Description: DUF41 33 Location: 5027006-5027276 bp Feature: gene Location: 5027317-5029344 bp Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 5027320-5029345 bp Feature: domain Description: Bac_Flav_CT_G Location: 5027320-5029345 bp Feature: gene Location: 5029974-5031629 bp Ori: QJR65814.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5030028-5030271 bp Feature: domain Description: RVT_N Location: 5030028-5030271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5030316-5030964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503031 6-5030964 bp Feature: domain Description: GIIM Note: maturase Location: 5031015-5031249 bp Feature: domain Description: GIIM Note: maturase Location: 5031 01 5-5031 249 bp Feature: gene Location: 5031632-5032222 bp Ori: QJR65815.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 5031749-5032205 bp Feature: domain Description: Bac_Flav_CT_G Location: 5031 749-5032205 bp Feature: gene Location: 5032267-5032650 bp Ori: QJR65816.1 Feature: domain Description: DUF3876 Location: 5032348-5032612 bp Feature: domain Description: DUF3876 Location: 5032348-503261 2 bp Feature: gene Location: 5032681-5032908 bp Ori: QJR65817.1 Feature: domain Description: DUF4141 Location: 5032693-5032849 bp Feature: domain Description: DUF41 41 Location: 5032693-5032849 bp Feature: gene Location: 5033459-5035264 bp Ori: QJR65818.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5033723-5034545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5033723-5034545 bp Feature: domain Description: matK Location: 5034722-5034935 bp Feature: domain Description: matK Location: 5034722-5034935 bp Feature: domain Description: HNHc Note: nucleases Location: 5035097-5035238 bp Feature: domain Description: HNHc Note: nucleases Location: 5035097-5035238 bp Feature: gene Location: 5035257-5035793 bp Feature: gene Location: 5035797-5036801 bp Ori: QJR65819.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 5035803-5036772 bp Feature: domain Description: Bac_Flav_CT_J Location: 5035803-5036772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), RVT-GII, matK (CHL00002), HNHc (smart00507), DUF4141 (pfam13605), DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), GIIM (pfam08388), DUF4133 (pfam13571)
Mob_Pre (pfam01076), Toprim_2 (pfam13155), Intron_maturas2 (pfam01348), dnaG (TIGR01391), AAA_25 (pfam13481), DUF4099 (pfam13351), DUF3945 (pfam13101), NlpD (COG0739), dam (TIGR00571), SusD-like_3 (pfam14322)
SusD_RagB (pfam07980), GDPD_like_2 (cd08582), HTH_28 (pfam13518), DUF3875 (pfam12991), PRK05182 (DNA-directed RNA polymerase subunit alpha; Provisional), COG2865 (Predicted transcriptional regulator, contains HTH domain ), DDE_Tnp_IS66 (pfam03050), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)
RVT-UG8, RVT-UG3, HTH_17 (pfam12728), DUF4134 (pfam13572)