myRT

myRT report for GCA_013010365.1_ASM1301036v1

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Seq: CP046428.1 Bacteroides dorei strain JR05 chromosome, complete genome (5571237 bp)
Overview 1 RT 1: 1942068-1951530 bp 2 RT 2: 2998349-3001516 bp 3 RT 3: 3526890-3532450 bp 4 RT 4: 5152849-5156786 bp Neighborhood of RT #1 [1942068, 1951530] Laminin_G_3 Laminin_G_3 RVT-DGRs Neighborhood of RT #2 [2998349, 3001545] RVT-DGRs HTH_XRE Gp49 Neighborhood of RT #3 [3526890, 3532923] COG2865 Toprim_2 RVT-GII Intron_maturas2 AAA_25 Neighborhood of RT #4 [5152849, 5156786] RVT-DGRs Feature: gene Location: 1942068-1948805 bp Ori: QJR54690.1 Feature: domain Description: Laminin_G_3 Location: 1943529-1943607 bp Feature: domain Description: Laminin_G_3 Location: 1 943529-1 943607 bp Feature: domain Description: Laminin_G_3 Location: 1944258-1944684 bp Feature: domain Description: Laminin_G_3 Location: 1 944258-1 944684 bp Feature: gene Location: 1948802-1948996 bp Feature: gene Location: 1949322-1950626 bp Ori: QJR54692.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1949535-1950129 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 949535-1 9501 29 bp Feature: gene Location: 1950623-1951108 bp Feature: gene Location: 1951288-1951530 bp Feature: gene Location: 2998349-2998585 bp Feature: gene Location: 2998592-2999074 bp Feature: gene Location: 2999143-3000633 bp Ori: QJR55530.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2999536-3000133 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2999536-30001 33 bp Feature: gene Location: 3000885-3001196 bp Ori: QJR55531.1 Feature: domain Description: HTH_XRE Location: 3000999-3001155 bp Feature: domain Description: HTH_XRE Location: 3000999-3001 1 55 bp Feature: gene Location: 3001201-3001545 bp Ori: QJR55532.1 Feature: domain Description: Gp49 Location: 3001255-3001516 bp Feature: domain Description: Gp49 Location: 3001 255-3001 51 6 bp Feature: gene Location: 3526890-3528326 bp Ori: QJR55921.1 Feature: domain Description: COG2865 Location: 3526893-3528315 bp Feature: domain Description: COG2865 Location: 3526893-352831 5 bp Feature: gene Location: 3528407-3529228 bp Ori: QJR57644.1 Feature: domain Description: Toprim_2 Location: 3528926-3529205 bp Feature: domain Description: Toprim_2 Location: 3528926-3529205 bp Feature: gene Location: 3529233-3531041 bp Ori: QJR55922.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3529497-3530319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3529497-353031 9 bp Feature: domain Description: Intron_maturas2 Location: 3530388-3530697 bp Feature: domain Description: Intron_maturas2 Location: 3530388-3530697 bp Feature: gene Location: 3531589-3531771 bp Feature: gene Location: 3531835-3532923 bp Ori: QJR55924.1 Feature: domain Description: AAA_25 Location: 3531985-3532450 bp Feature: domain Description: AAA_25 Location: 3531 985-3532450 bp Feature: gene Location: 5152849-5153127 bp Feature: gene Location: 5153137-5154498 bp Feature: gene Location: 5154831-5156018 bp Ori: QJR57206.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5155164-5155791 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51 551 64-51 55791 bp Feature: gene Location: 5155981-5156409 bp Feature: gene Location: 5156406-5156786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs, HTH_XRE (smart00530), Gp49 (pfam05973), COG2865 (Predicted transcriptional regulator, contains HTH domain ), Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348), AAA_25 (pfam13481)