myRT

myRT report for GCA_013047165.1_ASM1304716v1

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Seq: CP053210.1 Streptococcus pneumoniae strain 6A-10 chromosome, complete genome (2219840 bp)
Overview 1 RT 1: 983786-989069 bp 2 RT 2: 2156916-2161332 bp Neighborhood of RT #1 [983786, 989158] HTH_19 RVT-GII GIIM HTH_XRE RGG_Cterm NDP-sugDHase Neighborhood of RT #2 [2156916, 2161332] MFS_MefA_like RVT-GII GIIM Feature: gene Location: 983786-984025 bp Ori: QJS36734.1 Feature: domain Description: HTH_19 Location: 983789-983927 bp Feature: domain Description: HTH_1 9 Location: 983789-983927 bp Feature: gene Location: 984075-984431 bp Feature: gene Location: 985221-986387 bp Ori: QJS36736.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 985425-986040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 985425-986040 bp Feature: domain Description: GIIM Note: maturase Location: 986097-986307 bp Feature: domain Description: GIIM Note: maturase Location: 986097-986307 bp Feature: gene Location: 986759-987610 bp Ori: QJS36737.1 Feature: domain Description: HTH_XRE Location: 986840-986945 bp Feature: domain Description: HTH_XRE Location: 986840-986945 bp Feature: domain Description: RGG_Cterm Location: 986948-987605 bp Feature: domain Description: RGG_Cterm Location: 986948-987605 bp Feature: gene Location: 987863-989158 bp Ori: QJS36738.1 Feature: domain Description: NDP-sugDHase Location: 987908-989069 bp Feature: domain Description: NDP-sugDHase Location: 987908-989069 bp Feature: gene Location: 2156916-2157626 bp Ori: QJS37923.1 Feature: domain Description: MFS_MefA_like Location: 2156931-2157561 bp Feature: domain Description: MFS_MefA_like Location: 21 56931 -21 57561 bp Feature: gene Location: 2157831-2157989 bp Feature: gene Location: 2158081-2159358 bp Ori: QJS37925.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2158285-2158900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 58285-21 58900 bp Feature: domain Description: GIIM Note: maturase Location: 2158954-2159167 bp Feature: domain Description: GIIM Note: maturase Location: 21 58954-21 591 67 bp Feature: gene Location: 2160440-2161099 bp Feature: gene Location: 2161186-2161332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), RGG_Cterm (TIGR01716), NDP-sugDHase (TIGR03026), MFS_MefA_like (cd06173)