myRT

myRT report for GCA_013085185.1_ASM1308518v1

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Seq: CP053235.1 Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence (159399 bp)
Overview 1 RT 1: 86373-92748 bp Neighborhood of RT #1 [86373, 92750] TnpB_IS66 COG3436 RVT-GII GIIM DDE_Tnp_IS66_C PRK13484 Feature: gene Location: 86373-86720 bp Ori: QJS71376.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 86400-86691 bp Feature: domain Description: TnpB_IS66 Location: 86400-86691 bp Feature: gene Location: 86740-87992 bp Feature: domain Description: COG3436 Location: 86992-87463 bp Feature: domain Description: COG3436 Location: 86992-87463 bp Feature: gene Location: 88505-89737 bp Ori: QJS71377.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88706-89360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88706-89360 bp Feature: domain Description: GIIM Note: maturase Location: 89438-89660 bp Feature: domain Description: GIIM Note: maturase Location: 89438-89660 bp Feature: gene Location: 89820-89999 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 89865-89976 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 89865-89976 bp Feature: gene Location: 90702-92750 bp Ori: QJS71378.1 Gene: ireA Feature: domain Description: PRK13484 Location: 90705-92748 bp Feature: domain Description: PRK1 3484 Location: 90705-92748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), PRK13484 (IreA family TonB-dependent siderophore receptor)