myRT

myRT report for GCA_013085205.1_ASM1308520v1

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Seq: CP053246.1 Escherichia coli strain SCU-485 plasmid pSCU-485-1, complete sequence (111831 bp)
Overview 1 RT 1: 12922-17110 bp 2 RT 2: 26771-30168 bp Neighborhood of RT #1 [12922, 17110] InsE PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [26771, 30392] InsE RVT-GII PRK10173 Sigma70_r4_2 Sigma70_r4_2 Feature: gene Location: 12922-13326 bp Ori: QJS66442.1 Feature: domain Description: InsE Location: 12952-13288 bp Feature: domain Description: InsE Location: 1 2952-1 3288 bp Feature: gene Location: 13355-13738 bp Feature: domain Description: PHA02517 Location: 13361-13694 bp Feature: domain Description: PHA0251 7 Location: 1 3361 -1 3694 bp Feature: gene Location: 13828-15336 bp Ori: QJS66529.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14086-14818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4086-1 481 8 bp Feature: domain Description: GIIM Note: maturase Location: 14893-15091 bp Feature: domain Description: GIIM Note: maturase Location: 1 4893-1 5091 bp Feature: gene Location: 16009-16748 bp Feature: domain Description: InsE Location: 16012-16348 bp Feature: domain Description: InsE Location: 1 601 2-1 6348 bp Feature: gene Location: 16850-17110 bp Feature: gene Location: 26771-27076 bp Feature: gene Location: 27102-27841 bp Feature: domain Description: InsE Location: 27105-27441 bp Feature: domain Description: InsE Location: 271 05-27441 bp Feature: gene Location: 28514-29002 bp Ori: QJS66530.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28772-28844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28772-28844 bp Feature: gene Location: 29152-29785 bp Feature: domain Description: PRK10173 Location: 29155-29593 bp Feature: domain Description: PRK1 01 73 Location: 291 55-29593 bp Feature: gene Location: 29907-30392 bp Ori: QJS66450.1 Feature: domain Description: Sigma70_r4_2 Location: 29967-30039 bp Feature: domain Description: Sigma70_r4_2 Location: 29967-30039 bp Feature: domain Description: Sigma70_r4_2 Location: 30108-30168 bp Feature: domain Description: Sigma70_r4_2 Location: 301 08-301 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), Sigma70_r4_2 (pfam08281)