myRT

myRT report for GCA_013085485.1_ASM1308548v1

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Seq: CP038441.1 Aeromonas media strain T0.1-19 chromosome, complete genome (4917765 bp)
Overview 1 RT 1: 21169-25238 bp 2 RT 2: 4872100-4876242 bp 3 RT 3: 4879121-4885896 bp Neighborhood of RT #1 [21169, 25238] RVT-Retrons Neighborhood of RT #2 [4872100, 4876256] RVT-GII COG3547 PinE Neighborhood of RT #3 [4879121, 4885896] COG4644 DDE_Tnp_Tn3 COG3547 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 21169-21246 bp Feature: gene Location: 22129-22758 bp Feature: gene Location: 22765-24216 bp Ori: QJT20057.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23425-23977 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23425-23977 bp Feature: gene Location: 24373-24702 bp Feature: gene Location: 24771-25238 bp Feature: gene Location: 4872100-4872993 bp Feature: gene Location: 4873466-4873681 bp Feature: gene Location: 4873948-4874397 bp Ori: QJT24282.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4874185-4874341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48741 85-4874341 bp Feature: gene Location: 4874616-4875620 bp Ori: QJT23959.1 Feature: domain Description: COG3547 Location: 4874634-4875588 bp Feature: domain Description: COG3547 Location: 4874634-4875588 bp Feature: gene Location: 4875699-4876256 bp Ori: QJT23960.1 Feature: domain Description: PinE Location: 4875702-4876242 bp Feature: domain Description: PinE Location: 4875702-4876242 bp Feature: gene Location: 4879121-4882087 bp Ori: QJT23967.1 Feature: domain Description: COG4644 Location: 4879133-4879445 bp Feature: domain Description: COG4644 Location: 48791 33-4879445 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 4880861-4882019 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 4880861 -488201 9 bp Feature: gene Location: 4882166-4883170 bp Ori: QJT23968.1 Feature: domain Description: COG3547 Location: 4882184-4883138 bp Feature: domain Description: COG3547 Location: 48821 84-48831 38 bp Feature: gene Location: 4883345-4884097 bp Ori: QJT23969.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4883420-4883918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4883420-488391 8 bp Feature: domain Description: GIIM Note: maturase Location: 4883960-4884083 bp Feature: domain Description: GIIM Note: maturase Location: 4883960-4884083 bp Feature: gene Location: 4884094-4885368 bp Ori: QJT23970.1 Feature: domain Description: DDE_Tnp_1 Location: 4884445-4885123 bp Feature: domain Description: DDE_Tnp_1 Location: 4884445-48851 23 bp Feature: gene Location: 4885525-4885896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, RVT-GII, COG3547 (Transposase ), PinE (COG1961), COG4644 (Transposase and inactivated derivatives, TnpA family ), DDE_Tnp_Tn3 (pfam01526), GIIM (pfam08388), DDE_Tnp_1 (pfam01609)