myRT

myRT report for GCA_013085885.1_ASM1308588v1

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Seq: CP048416.1 Citrobacter freundii strain CitB chromosome, complete genome (4827866 bp)
Overview 1 RT 1: 644926-654891 bp 2 RT 2: 1362264-1372135 bp Neighborhood of RT #1 [644926, 654977] DUF1889 Arm-DNA-bind_3 INT_P4_C RVT-UG1 RT_Bac_retron_II HsdM RMtype1_S_StySKI-TRD2-CR2_like RMtype1_S_StySKI-TRD2-CR2_like Neighborhood of RT #2 [1362264, 1372135] TrbL_P TrbL VbhA_like VapI RVT-UG10 HTH_Tnp_1 Feature: gene Location: 644926-645249 bp Ori: QJT74333.1 Feature: domain Description: DUF1889 Location: 644929-645247 bp Feature: domain Description: DUF1 889 Location: 644929-645247 bp Feature: gene Location: 645710-647017 bp Ori: QJT74334.1 Feature: domain Description: Arm-DNA-bind_3 Location: 645725-645992 bp Feature: domain Description: Arm-DNA-bind_3 Location: 645725-645992 bp Feature: domain Description: INT_P4_C Location: 646409-646958 bp Feature: domain Description: INT_P4_C Location: 646409-646958 bp Feature: gene Location: 647311-651087 bp Ori: QJT77969.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 647929-648436 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 647929-648436 bp Feature: domain Description: RT_Bac_retron_II Location: 650230-650398 bp Feature: domain Description: RT_Bac_retron_II Location: 650230-650398 bp Feature: gene Location: 651295-653655 bp Ori: QJT74335.1 Feature: domain Description: HsdM Location: 651319-652723 bp Feature: domain Description: HsdM Location: 651 31 9-652723 bp Feature: gene Location: 653655-654977 bp Ori: QJT74336.1 Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 654021-654276 bp Feature: domain Description: RMtype1 _S_StySKI-TRD2-CR2_like Location: 654021 -654276 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 654312-654891 bp Feature: domain Description: RMtype1 _S_StySKI-TRD2-CR2_like Location: 65431 2-654891 bp Feature: gene Location: 1362264-1363655 bp Ori: QJT74932.1 Gene: trbL Feature: domain Description: TrbL_P Location: 1362342-1363239 bp Feature: domain Description: TrbL_P Location: 1 362342-1 363239 bp Feature: domain Description: TrbL Location: 1363368-1363611 bp Feature: domain Description: TrbL Location: 1 363368-1 36361 1 bp Feature: gene Location: 1363737-1364171 bp Ori: QJT74933.1 Feature: domain Description: VbhA_like Location: 1363752-1363914 bp Feature: domain Description: VbhA_like Location: 1 363752-1 36391 4 bp Feature: domain Description: VapI Location: 1363926-1364166 bp Feature: domain Description: VapI Location: 1 363926-1 3641 66 bp Feature: gene Location: 1364353-1369683 bp Ori: QJT74934.1 Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 1365685-1366345 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 365685-1 366345 bp Feature: gene Location: 1370124-1370413 bp Feature: domain Description: HTH_Tnp_1 Location: 1370130-1370334 bp Feature: domain Description: HTH_Tnp_1 Location: 1 3701 30-1 370334 bp Feature: gene Location: 1371479-1372135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1889 (pfam08986), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-UG1, RT_Bac_retron_II (cd03487), HsdM (COG0286), RMtype1_S_StySKI-TRD2-CR2_like (cd17259), TrbL_P (TIGR02783), TrbL (pfam04610), VbhA_like (cl17006)
VapI (COG3093), RVT-UG10, HTH_Tnp_1 (pfam01527)