myRT

myRT report for GCA_013085905.1_ASM1308590v1

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Seq: CP053251.1 Escherichia coli strain SCU-204 chromosome, complete genome (5121204 bp)
Overview 1 RT 1: 1055442-1061137 bp Neighborhood of RT #1 [1055442, 1061163] YesN YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 1055442-1055801 bp Feature: domain Description: YesN Location: 1055445-1055796 bp Feature: domain Description: YesN Location: 1 055445-1 055796 bp Feature: gene Location: 1055818-1057047 bp Ori: QJT89346.1 Feature: domain Description: YesM Location: 1056295-1057039 bp Feature: domain Description: YesM Location: 1 056295-1 057039 bp Feature: gene Location: 1057630-1058151 bp Ori: QJT89347.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057636-1057918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 057636-1 05791 8 bp Feature: domain Description: GIIM Note: maturase Location: 1057966-1058146 bp Feature: domain Description: GIIM Note: maturase Location: 1 057966-1 0581 46 bp Feature: gene Location: 1058327-1058718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058657-1058717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 058657-1 05871 7 bp Feature: gene Location: 1059204-1060109 bp Feature: gene Location: 1060246-1061163 bp Ori: QJT89349.1 Feature: domain Description: PFLE_PFLC Location: 1060282-1061137 bp Feature: domain Description: PFLE_PFLC Location: 1 060282-1 061 1 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesN (COG4753), YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)

Seq: CP053253.1 Escherichia coli strain SCU-204 plasmid pSCU-204-1, complete sequence (174260 bp)
Overview 1 RT 1: 35014-39202 bp 2 RT 2: 48846-52243 bp Neighborhood of RT #1 [35014, 39202] InsE PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [48846, 52467] InsE RVT-GII PRK10173 Sigma70_r4_2 Sigma70_r4_2 Feature: gene Location: 35014-35418 bp Ori: QJT93099.1 Feature: domain Description: InsE Location: 35044-35380 bp Feature: domain Description: InsE Location: 35044-35380 bp Feature: gene Location: 35447-35830 bp Feature: domain Description: PHA02517 Location: 35453-35786 bp Feature: domain Description: PHA02 517 Location: 35453-35786 bp Feature: gene Location: 35920-37428 bp Ori: QJT93221.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36178-36910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36178-36910 bp Feature: domain Description: GIIM Note: maturase Location: 36985-37183 bp Feature: domain Description: GIIM Note: maturase Location: 36985-37183 bp Feature: gene Location: 38101-38840 bp Feature: domain Description: InsE Location: 38104-38440 bp Feature: domain Description: InsE Location: 38104-38440 bp Feature: gene Location: 38942-39202 bp Feature: gene Location: 48846-49151 bp Feature: gene Location: 49177-49916 bp Feature: domain Description: InsE Location: 49180-49516 bp Feature: domain Description: InsE Location: 49180-49516 bp Feature: gene Location: 50589-51077 bp Ori: QJT93222.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50847-50919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50847-50919 bp Feature: gene Location: 51227-51860 bp Feature: domain Description: PRK10173 Location: 51230-51668 bp Feature: domain Description: PRK10173 Location: 512 30-51668 bp Feature: gene Location: 51982-52467 bp Ori: QJT93108.1 Feature: domain Description: Sigma70_r4_2 Location: 52042-52114 bp Feature: domain Description: Sigma70_r4_2 Location: 52 042 -52 114 bp Feature: domain Description: Sigma70_r4_2 Location: 52183-52243 bp Feature: domain Description: Sigma70_r4_2 Location: 52 183-52 2 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), Sigma70_r4_2 (pfam08281)