myRT

myRT report for GCA_013112415.1_ASM1311241v1

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Seq: CP053292.1 Clostridium butyricum strain 16-3 chromosome 1, complete sequence (3861515 bp)
Overview 1 RT 1: 252637-257294 bp 2 RT 2: 3081131-3088667 bp Neighborhood of RT #1 [252637, 257311] TraX GalU RVT-GII COG3666 DDE_Tnp_1_6 COG4870 Neighborhood of RT #2 [3081131, 3088687] HTH_BmrR MoaF MoaF_C RVT-UG5 nitrilase PinE RES Feature: gene Location: 252637-253455 bp Ori: QJU42994.1 Feature: domain Description: TraX Location: 252667-253438 bp Feature: domain Description: TraX Location: 252667-253438 bp Feature: gene Location: 253764-254663 bp Ori: QJU46095.1 Gene: galU Feature: domain Description: GalU Location: 253773-254631 bp Feature: domain Description: GalU Location: 253773-254631 bp Feature: gene Location: 254839-255348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255139-255349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2551 39-255349 bp Feature: gene Location: 255343-256020 bp Feature: domain Description: COG3666 Location: 255400-255724 bp Feature: domain Description: COG3666 Location: 255400-255724 bp Feature: domain Description: DDE_Tnp_1_6 Location: 255886-256018 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 255886-25601 8 bp Feature: gene Location: 256472-257311 bp Ori: QJU42995.1 Feature: domain Description: COG4870 Location: 256586-257294 bp Feature: domain Description: COG4870 Location: 256586-257294 bp Feature: gene Location: 3081131-3081940 bp Ori: QJU45446.1 Feature: domain Description: HTH_BmrR Location: 3081146-3081470 bp Feature: domain Description: HTH_BmrR Location: 3081 1 46-3081 470 bp Feature: gene Location: 3081972-3082799 bp Ori: QJU45447.1 Feature: domain Description: MoaF Location: 3081996-3082320 bp Feature: domain Description: MoaF Location: 3081 996-3082320 bp Feature: domain Description: MoaF_C Location: 3082443-3082785 bp Feature: domain Description: MoaF_C Location: 3082443-3082785 bp Feature: gene Location: 3083653-3086640 bp Ori: QJU45448.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3084154-3084664 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30841 54-3084664 bp Feature: domain Description: nitrilase Location: 3085825-3086488 bp Feature: domain Description: nitrilase Location: 3085825-3086488 bp Feature: gene Location: 3086940-3087545 bp Ori: QJU45449.1 Feature: domain Description: PinE Location: 3086946-3087513 bp Feature: domain Description: PinE Location: 3086946-308751 3 bp Feature: gene Location: 3087620-3088687 bp Ori: QJU45450.1 Feature: domain Description: RES Location: 3088154-3088667 bp Feature: domain Description: RES Location: 30881 54-3088667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraX (pfam05857), GalU (COG1210), RVT-GII, COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), COG4870 (Cysteine protease, C1A family ), HTH_BmrR (cd01107), MoaF (pfam10703), MoaF_C (pfam17409), RVT-UG5
nitrilase (cl11424), PinE (COG1961), RES (smart00953)

Seq: CP053293.1 Clostridium butyricum strain 16-3 chromosome 2, complete sequence (769300 bp)
Overview 1 RT 1: 148469-157078 bp Neighborhood of RT #1 [148469, 157089] RVT-Retrons ADA MarR Feature: gene Location: 148469-151405 bp Feature: gene Location: 151405-153213 bp Feature: gene Location: 153210-154718 bp Ori: QJU46310.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 153846-154494 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 153846-154494 bp Feature: gene Location: 155307-156299 bp Ori: QJU46311.1 Feature: domain Description: ADA Location: 155322-156291 bp Feature: domain Description: ADA Location: 15532 2 -1562 91 bp Feature: gene Location: 156658-157089 bp Ori: QJU46312.1 Feature: domain Description: MarR Location: 156703-157078 bp Feature: domain Description: MarR Location: 156703-157078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ADA (cd01320), MarR (pfam01047)