myRT

myRT report for GCA_013146705.1_ASM1314670v1

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Seq: CP045273.1 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence (1081311 bp)
Overview 1 RT 1: 698528-706011 bp 2 RT 2: 1019391-1025921 bp Neighborhood of RT #1 [698528, 706055] YgaE GGDEF RVT-GII clpX Neighborhood of RT #2 [1019391, 1026277] RVT-GII NERD fliL Feature: gene Location: 698528-699643 bp Ori: QJX80621.1 Feature: domain Description: YgaE Location: 698531-699326 bp Feature: domain Description: YgaE Location: 698531 -699326 bp Feature: gene Location: 699689-700600 bp Ori: QJX80622.1 Feature: domain Description: GGDEF Location: 700172-700595 bp Feature: domain Description: GGDEF Location: 7001 72-700595 bp Feature: gene Location: 700931-702934 bp Ori: QJX80623.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701279-701981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701 279-701 981 bp Feature: gene Location: 704031-704612 bp Feature: gene Location: 704937-706055 bp Ori: QJX80625.1 Gene: clpX Feature: domain Description: clpX Location: 704943-706011 bp Feature: domain Description: clpX Location: 704943-70601 1 bp Feature: gene Location: 1019391-1020158 bp Feature: gene Location: 1020261-1020647 bp Feature: gene Location: 1021004-1022917 bp Ori: QJX81031.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1021247-1021955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 021 247-1 021 955 bp Feature: gene Location: 1024276-1024749 bp Feature: gene Location: 1024934-1026277 bp Ori: QJX80950.1 Feature: domain Description: NERD Location: 1025012-1025288 bp Feature: domain Description: NERD Location: 1 02501 2-1 025288 bp Feature: domain Description: fliL Location: 1025768-1025921 bp Feature: domain Description: fliL Location: 1 025768-1 025921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgaE (COG4129), GGDEF (TIGR00254), RVT-GII, clpX, NERD (pfam08378), fliL (PRK12785)

Seq: CP045275.1 Bacillus megaterium strain FDU301 plasmid pFDU301C, complete sequence (127523 bp)
Overview 1 RT 1: 102558-112507 bp Neighborhood of RT #1 [102558, 112542] EamA EamA PRK09943 RVT_N RVT-GII GIIM YjbI RVT_N RVT-GII GIIM STAS_RsbR_RsbS_like STAS_RsbR_RsbS_like Feature: gene Location: 102558-103487 bp Ori: QJX81292.1 Feature: domain Description: EamA Location: 102576-102984 bp Feature: domain Description: EamA Location: 102 576-102 984 bp Feature: domain Description: EamA Location: 103026-103419 bp Feature: domain Description: EamA Location: 10302 6-103419 bp Feature: gene Location: 103598-104161 bp Ori: QJX81293.1 Feature: domain Description: PRK09943 Location: 103601-104114 bp Feature: domain Description: PRK09943 Location: 103601-104114 bp Feature: gene Location: 105287-106936 bp Ori: QJX81294.1 Gene: ltrA Feature: domain Description: RVT_N Location: 105335-105581 bp Feature: domain Description: RVT_N Location: 105335-105581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105635-106295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105635-1062 95 bp Feature: domain Description: GIIM Note: maturase Location: 106361-106592 bp Feature: domain Description: GIIM Note: maturase Location: 106361-106592 bp Feature: gene Location: 107153-108022 bp Ori: QJX81295.1 Feature: domain Description: YjbI Location: 107210-107993 bp Feature: domain Description: YjbI Location: 1072 10-107993 bp Feature: gene Location: 108663-110312 bp Ori: QJX81296.1 Gene: ltrA Feature: domain Description: RVT_N Location: 108711-108957 bp Feature: domain Description: RVT_N Location: 108711-108957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109011-109671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109011-109671 bp Feature: domain Description: GIIM Note: maturase Location: 109737-109971 bp Feature: domain Description: GIIM Note: maturase Location: 109737-109971 bp Feature: gene Location: 110609-111466 bp Ori: QJX81297.1 Feature: domain Description: STAS_RsbR_RsbS_like Location: 111095-111419 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 111095-111419 bp Feature: gene Location: 111709-112542 bp Ori: QJX81298.1 Feature: domain Description: STAS_RsbR_RsbS_like Location: 112183-112507 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 112 183-112 507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EamA (pfam00892), PRK09943 (HTH-type transcriptional regulator PuuR), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YjbI (COG2346), STAS_RsbR_RsbS_like (cd07041)