myRT

myRT report for GCA_013167075.1_ASM1316707v1

Download annotations/find similar RTs

Seq: CP053608.1 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence (242042 bp)
Overview 1 RT 1: 25698-31821 bp Neighborhood of RT #1 [25698, 31823] HTH_38 Tra8 PHA02517 RVT-GII IS5 PRK11387 Feature: gene Location: 25698-26849 bp Ori: QJZ27647.1 Feature: domain Description: HTH_38 Location: 25707-25821 bp Feature: domain Description: HTH_38 Location: 25707-25821 bp Feature: domain Description: Tra8 Location: 25857-26838 bp Feature: domain Description: Tra8 Location: 25857-26838 bp Feature: gene Location: 26859-27284 bp Feature: domain Description: PHA02517 Location: 26949-27285 bp Feature: domain Description: PHA0251 7 Location: 26949-27285 bp Feature: gene Location: 27957-29048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28215-28947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2821 5-28947 bp Feature: gene Location: 29196-30212 bp Ori: QJZ27648.1 Feature: domain Description: IS5 Location: 29421-30198 bp Feature: domain Description: IS5 Location: 29421 -301 98 bp Feature: gene Location: 30420-31823 bp Ori: QJZ27818.1 Gene: mmuP Feature: domain Description: PRK11387 Location: 30426-31821 bp Feature: domain Description: PRK1 1 387 Location: 30426-31 821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, IS5 (COG3039), PRK11387 (S-methylmethionine permease)

Seq: CP053607.1 Escherichia coli strain NEB5-alpha_F'Iq chromosome, complete genome (4585413 bp)
Overview 1 RT 1: 273841-278884 bp Neighborhood of RT #1 [273841, 278922] HTH_38 Tra8 PHA02517 RVT-GII IS5 PRK11387 MhpD Feature: gene Location: 273841-274992 bp Ori: QJZ23700.1 Feature: domain Description: HTH_38 Location: 273850-273964 bp Feature: domain Description: HTH_38 Location: 2 73850-2 73964 bp Feature: domain Description: Tra8 Location: 274000-274981 bp Feature: domain Description: Tra8 Location: 2 74000-2 74981 bp Feature: gene Location: 275002-275427 bp Feature: domain Description: PHA02517 Location: 275092-275428 bp Feature: domain Description: PHA02 517 Location: 2 75092 -2 7542 8 bp Feature: gene Location: 276100-277191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276358-277090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76358-2 77090 bp Feature: gene Location: 277339-278355 bp Ori: QJZ23701.1 Feature: domain Description: IS5 Location: 277564-278341 bp Feature: domain Description: IS5 Location: 2 77564-2 78341 bp Feature: gene Location: 278563-278922 bp Ori: QJZ27460.1 Feature: domain Description: PRK11387 Location: 278569-278773 bp Feature: domain Description: PRK11387 Location: 2 78569-2 78773 bp Feature: domain Description: MhpD Location: 278773-278884 bp Feature: domain Description: MhpD Location: 2 78773-2 78884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, IS5 (COG3039), PRK11387 (S-methylmethionine permease), MhpD (COG3971)