myRT

myRT report for GCA_013167415.1_ASM1316741v1

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Seq: CP038323.1 Escherichia coli O157:H7 strain NE1127 plasmid pNE1127-1, complete sequence (92701 bp)
Overview 1 RT 1: 79733-83304 bp Neighborhood of RT #1 [79733, 83304] DUF1281 DUF1281_C RVT_N RVT-GII YkfC HNHc Feature: gene Location: 79733-80038 bp Feature: gene Location: 80042-80944 bp Ori: QKA07692.1 Feature: domain Description: DUF1281 Location: 80111-80639 bp Feature: domain Description: DUF1 281 Location: 801 1 1 -80639 bp Feature: domain Description: DUF1281_C Location: 80645-80873 bp Feature: domain Description: DUF1 281 _C Location: 80645-80873 bp Feature: gene Location: 81021-82745 bp Ori: QKA07693.1 Gene: ltrA Feature: domain Description: RVT_N Location: 81078-81315 bp Feature: domain Description: RVT_N Location: 81 078-81 31 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81366-82014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 366-8201 4 bp Feature: domain Description: YkfC Location: 82146-82302 bp Feature: domain Description: YkfC Location: 821 46-82302 bp Feature: domain Description: HNHc Note: nucleases Location: 82530-82689 bp Feature: domain Description: HNHc Note: nucleases Location: 82530-82689 bp Feature: gene Location: 82767-82981 bp Feature: gene Location: 83008-83304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)