myRT

myRT report for GCA_013167435.1_ASM1316743v1

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Seq: CP038327.1 Escherichia coli O157:H7 strain NE 1169-1 plasmid pNE1169-1, complete sequence (92704 bp)
Overview 1 RT 1: 55904-59475 bp Neighborhood of RT #1 [55904, 59475] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 55904-56200 bp Feature: gene Location: 56227-56441 bp Feature: gene Location: 56463-58187 bp Ori: QKA13181.1 Gene: ltrA Feature: domain Description: RVT_N Location: 56520-56757 bp Feature: domain Description: RVT_N Location: 56520-56757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56808-57456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56808-57456 bp Feature: domain Description: YkfC Location: 57588-57744 bp Feature: domain Description: YkfC Location: 57588-57744 bp Feature: domain Description: HNHc Note: nucleases Location: 57972-58131 bp Feature: domain Description: HNHc Note: nucleases Location: 57972-581 31 bp Feature: gene Location: 58264-59166 bp Ori: QKA13182.1 Feature: domain Description: DUF1281 Location: 58333-58861 bp Feature: domain Description: DUF1 281 Location: 58333-58861 bp Feature: domain Description: DUF1281_C Location: 58867-59095 bp Feature: domain Description: DUF1 281 _C Location: 58867-59095 bp Feature: gene Location: 59170-59475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)