myRT

myRT report for GCA_013167775.1_ASM1316777v1

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Seq: CP038373.1 Escherichia coli O157:H7 strain F6294 plasmid pF6294-1, complete sequence (92725 bp)
Overview 1 RT 1: 35716-39287 bp Neighborhood of RT #1 [35716, 39287] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 35716-36012 bp Feature: gene Location: 36039-36253 bp Feature: gene Location: 36275-37999 bp Ori: QKB04495.1 Gene: ltrA Feature: domain Description: RVT_N Location: 36332-36569 bp Feature: domain Description: RVT_N Location: 36332-36569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36620-37268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36620-37268 bp Feature: domain Description: YkfC Location: 37400-37556 bp Feature: domain Description: YkfC Location: 37400-37556 bp Feature: domain Description: HNHc Note: nucleases Location: 37784-37943 bp Feature: domain Description: HNHc Note: nucleases Location: 37784-37943 bp Feature: gene Location: 38076-38978 bp Ori: QKB04496.1 Feature: domain Description: DUF1281 Location: 38145-38673 bp Feature: domain Description: DUF1 281 Location: 381 45-38673 bp Feature: domain Description: DUF1281_C Location: 38679-38907 bp Feature: domain Description: DUF1 281 _C Location: 38679-38907 bp Feature: gene Location: 38982-39287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: CP038372.1 Escherichia coli O157:H7 strain F6294 chromosome, complete genome (5593140 bp)
Overview 1 RT 1: 3211151-3214369 bp Neighborhood of RT #1 [3211151, 3214371] RVT_N RVT-GII YkfC HNHc Phage_tail_U Minor_tail_Z Feature: gene Location: 3211151-3211447 bp Feature: gene Location: 3211474-3211688 bp Feature: gene Location: 3211710-3213434 bp Ori: QKB02079.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3211767-3212004 bp Feature: domain Description: RVT_N Location: 32 11767-32 12 004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3212055-3212703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 12 055-32 12 703 bp Feature: domain Description: YkfC Location: 3212835-3212991 bp Feature: domain Description: YkfC Location: 32 12 835-32 12 991 bp Feature: domain Description: HNHc Note: nucleases Location: 3213219-3213378 bp Feature: domain Description: HNHc Note: nucleases Location: 32 132 19-32 13378 bp Feature: gene Location: 3213467-3213796 bp Ori: QKB02080.1 Feature: domain Description: Phage_tail_U Location: 3213470-3213758 bp Feature: domain Description: Phage_tail_U Location: 32 13470-32 13758 bp Feature: gene Location: 3213793-3214371 bp Ori: QKB02081.1 Feature: domain Description: Minor_tail_Z Location: 3213802-3214369 bp Feature: domain Description: Minor_tail_Z Location: 32 13802 -32 14369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), Phage_tail_U (pfam06141), Minor_tail_Z (pfam06763)