myRT

myRT report for GCA_013167995.1_ASM1316799v1

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Seq: CP038393.1 Escherichia coli O157:H7 strain DEC5B plasmid pDEC5B-5, complete sequence (99707 bp)
Overview 1 RT 1: 22574-24749 bp 2 RT 2: 70908-74626 bp Neighborhood of RT #1 [22574, 24760] InsE rve_2 rve_3 RVT-GII GIIM DDE_Tnp_IS1 Neighborhood of RT #2 [70908, 74631] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 22574-23692 bp Feature: domain Description: InsE Location: 22601-22868 bp Feature: domain Description: InsE Location: 22601 -22868 bp Feature: domain Description: rve_2 Location: 23519-23687 bp Feature: domain Description: rve_2 Location: 2351 9-23687 bp Feature: gene Location: 23754-23972 bp Feature: domain Description: rve_3 Location: 23760-23832 bp Feature: domain Description: rve_3 Location: 23760-23832 bp Feature: gene Location: 23927-24505 bp Ori: QKB35859.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23933-24074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23933-24074 bp Feature: domain Description: GIIM Note: maturase Location: 24155-24374 bp Feature: domain Description: GIIM Note: maturase Location: 241 55-24374 bp Feature: gene Location: 24520-24603 bp Feature: gene Location: 24626-24760 bp Feature: domain Description: DDE_Tnp_IS1 Location: 24629-24749 bp Feature: domain Description: DDE_Tnp_IS1 Location: 24629-24749 bp Feature: gene Location: 70908-71114 bp Feature: gene Location: 71101-71178 bp Feature: gene Location: 71792-73693 bp Ori: QKB35900.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72059-72890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72059-72890 bp Feature: domain Description: Intron_maturas2 Location: 73004-73262 bp Feature: domain Description: Intron_maturas2 Location: 73004-73262 bp Feature: domain Description: HNHc Note: nucleases Location: 73436-73598 bp Feature: domain Description: HNHc Note: nucleases Location: 73436-73598 bp Feature: gene Location: 73843-74340 bp Ori: QKB35901.1 Gene: ssb Feature: domain Description: PRK13732 Location: 73846-74338 bp Feature: domain Description: PRK1 3732 Location: 73846-74338 bp Feature: gene Location: 74398-74631 bp Ori: QKB35902.1 Feature: domain Description: DUF905 Location: 74428-74626 bp Feature: domain Description: DUF905 Location: 74428-74626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), rve_2 (pfam13333), rve_3 (pfam13683), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS1 (pfam03400), Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)