myRT

myRT report for GCA_013171305.1_ASM1317130v1

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Seq: CP053042.1 Proteus cibarius strain HNCF44W chromosome, complete genome (3929176 bp)
Overview 1 RT 1: 332291-337966 bp 2 RT 2: 2472202-2479250 bp Neighborhood of RT #1 [332291, 337966] Phage_antitermQ PRK07006 RVT-Retrons AAA_15 AAA_15 Neighborhood of RT #2 [2472202, 2479267] groES groEL RVT_N RVT-GII GIIM HNHc a_cpa1 Feature: gene Location: 332291-332590 bp Feature: domain Description: Phage_antitermQ Location: 332294-332546 bp Feature: domain Description: Phage_antitermQ Location: 332294-332546 bp Feature: gene Location: 332791-332958 bp Feature: domain Description: PRK07006 Location: 332794-332956 bp Feature: domain Description: PRK07006 Location: 332794-332956 bp Feature: gene Location: 333535-334635 bp Ori: QKD71647.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 333679-334240 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 333679-334240 bp Feature: gene Location: 334808-336928 bp Ori: QKD71648.1 Feature: domain Description: AAA_15 Location: 334811-335171 bp Feature: domain Description: AAA_1 5 Location: 33481 1 -3351 71 bp Feature: domain Description: AAA_15 Location: 335366-335795 bp Feature: domain Description: AAA_1 5 Location: 335366-335795 bp Feature: gene Location: 337325-337966 bp Feature: gene Location: 2472202-2472495 bp Ori: QKD73412.1 Feature: domain Description: groES Location: 2472205-2472490 bp Feature: domain Description: groES Location: 2472205-2472490 bp Feature: gene Location: 2472548-2474194 bp Ori: QKD73413.1 Gene: groL Feature: domain Description: groEL Location: 2472554-2474177 bp Feature: domain Description: groEL Location: 2472554-24741 77 bp Feature: gene Location: 2475306-2476970 bp Ori: QKD73414.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2475357-2475600 bp Feature: domain Description: RVT_N Location: 2475357-2475600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2475645-2476290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2475645-2476290 bp Feature: domain Description: GIIM Note: maturase Location: 2476344-2476575 bp Feature: domain Description: GIIM Note: maturase Location: 2476344-2476575 bp Feature: domain Description: HNHc Note: nucleases Location: 2476788-2476947 bp Feature: domain Description: HNHc Note: nucleases Location: 2476788-2476947 bp Feature: gene Location: 2477061-2477312 bp Feature: gene Location: 2477636-2479267 bp Ori: QKD73416.1 Feature: domain Description: a_cpa1 Location: 2477663-2479250 bp Feature: domain Description: a_cpa1 Location: 2477663-2479250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_antitermQ (pfam06530), PRK07006 (isocitrate dehydrogenase; Reviewed), RVT-Retrons, AAA_15 (pfam13175), groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)
a_cpa1 (TIGR00831)