myRT

myRT report for GCA_013181395.1_ASM1318139v1

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Seq: CP053675.1 Ferrovum myxofaciens isolate MI1A chromosome, complete genome (2749106 bp)
Overview 1 RT 1: 1088904-1098689 bp 2 RT 2: 1803480-1807546 bp Neighborhood of RT #1 [1088904, 1098689] Y1_Tnp RVT-GII GIIM IstB_IS21_ATP IstB_IS21 COG4584 COG4584 RVT-GII InsQ InsQ Neighborhood of RT #2 [1803480, 1807584] CRISPR_Cas6 DUF1874 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Cas2_I_II_III Feature: gene Location: 1088904-1090430 bp Feature: gene Location: 1090427-1090834 bp Ori: QKE38194.1 Gene: tnpA Feature: domain Description: Y1_Tnp Location: 1090472-1090823 bp Feature: domain Description: Y1 _Tnp Location: 1 090472-1 090823 bp Feature: gene Location: 1091627-1092328 bp Ori: QKE39723.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1091666-1091885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 091 666-1 091 885 bp Feature: domain Description: GIIM Note: maturase Location: 1091933-1092158 bp Feature: domain Description: GIIM Note: maturase Location: 1 091 933-1 0921 58 bp Feature: gene Location: 1092463-1092711 bp Feature: gene Location: 1092804-1093577 bp Ori: QKE38195.1 Feature: domain Description: IstB_IS21_ATP Location: 1092876-1092957 bp Feature: domain Description: IstB_IS21 _ATP Location: 1 092876-1 092957 bp Feature: domain Description: IstB_IS21 Location: 1092963-1093494 bp Feature: domain Description: IstB_IS21 Location: 1 092963-1 093494 bp Feature: gene Location: 1093589-1095112 bp Ori: QKE38196.1 Feature: domain Description: COG4584 Location: 1093688-1094480 bp Feature: domain Description: COG4584 Location: 1 093688-1 094480 bp Feature: domain Description: COG4584 Location: 1094594-1094984 bp Feature: domain Description: COG4584 Location: 1 094594-1 094984 bp Feature: gene Location: 1095322-1096056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1095652-1096057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 095652-1 096057 bp Feature: gene Location: 1096892-1098130 bp Ori: QKE38197.1 Gene: tnpB Feature: domain Description: InsQ Location: 1096910-1097558 bp Feature: domain Description: InsQ Location: 1 09691 0-1 097558 bp Feature: domain Description: InsQ Location: 1097630-1098083 bp Feature: domain Description: InsQ Location: 1 097630-1 098083 bp Feature: gene Location: 1098402-1098689 bp Feature: gene Location: 1803480-1804376 bp Ori: QKE38808.1 Gene: cas6 Feature: domain Description: CRISPR_Cas6 Location: 1803942-1804314 bp Feature: domain Description: CRISPR_Cas6 Location: 1 803942-1 80431 4 bp Feature: gene Location: 1804431-1804748 bp Ori: QKE38809.1 Feature: domain Description: DUF1874 Location: 1804437-1804722 bp Feature: domain Description: DUF1 874 Location: 1 804437-1 804722 bp Feature: gene Location: 1804881-1807010 bp Ori: QKE38810.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1805085-1805694 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 805085-1 805694 bp Feature: domain Description: Cas1_I-II-III Location: 1806012-1806975 bp Feature: domain Description: Cas1 _I-II-III Location: 1 80601 2-1 806975 bp Feature: gene Location: 1807031-1807309 bp Ori: QKE38811.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1807043-1807259 bp Feature: domain Description: Cas2_I_II_III Location: 1 807043-1 807259 bp Feature: gene Location: 1807309-1807584 bp Ori: QKE38812.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1807318-1807546 bp Feature: domain Description: Cas2_I_II_III Location: 1 80731 8-1 807546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), RVT-GII, GIIM (pfam08388), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase ), InsQ (COG0675), CRISPR_Cas6 (pfam10040), DUF1874 (pfam08960), RVT-CRISPR
Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)