myRT

myRT report for GCA_013181415.1_ASM1318141v1

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Seq: CP053676.1 Ferrovum myxofaciens isolate S2.4 chromosome, complete genome (2673932 bp)
Overview 1 RT 1: 1811959-1816025 bp 2 RT 2: 2614345-2619414 bp Neighborhood of RT #1 [1811959, 1816063] CRISPR_Cas6 DUF1874 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Cas2_I_II_III Neighborhood of RT #2 [2614345, 2619416] OmpW PRK09249 RVT-GII GIIM PRK10858 Feature: gene Location: 1811959-1812855 bp Ori: QKE41394.1 Gene: cas6 Feature: domain Description: CRISPR_Cas6 Location: 1812421-1812793 bp Feature: domain Description: CRISPR_Cas6 Location: 1 81 2421 -1 81 2793 bp Feature: gene Location: 1812910-1813227 bp Ori: QKE41395.1 Feature: domain Description: DUF1874 Location: 1812916-1813201 bp Feature: domain Description: DUF1 874 Location: 1 81 291 6-1 81 3201 bp Feature: gene Location: 1813360-1815489 bp Ori: QKE41396.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1813564-1814173 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 81 3564-1 81 41 73 bp Feature: domain Description: Cas1_I-II-III Location: 1814491-1815454 bp Feature: domain Description: Cas1 _I-II-III Location: 1 81 4491 -1 81 5454 bp Feature: gene Location: 1815510-1815788 bp Ori: QKE41397.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1815522-1815738 bp Feature: domain Description: Cas2_I_II_III Location: 1 81 5522-1 81 5738 bp Feature: gene Location: 1815788-1816063 bp Ori: QKE41398.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1815797-1816025 bp Feature: domain Description: Cas2_I_II_III Location: 1 81 5797-1 81 6025 bp Feature: gene Location: 2614345-2614995 bp Ori: QKE42113.1 Feature: domain Description: OmpW Location: 2614384-2614993 bp Feature: domain Description: OmpW Location: 261 4384-261 4993 bp Feature: gene Location: 2615207-2616601 bp Ori: QKE42409.1 Gene: hemN Feature: domain Description: PRK09249 Location: 2615231-2616596 bp Feature: domain Description: PRK09249 Location: 261 5231 -261 6596 bp Feature: gene Location: 2617090-2618481 bp Ori: QKE42114.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2617420-2618038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 7420-261 8038 bp Feature: domain Description: GIIM Note: maturase Location: 2618086-2618311 bp Feature: domain Description: GIIM Note: maturase Location: 261 8086-261 831 1 bp Feature: gene Location: 2618703-2618987 bp Feature: gene Location: 2619078-2619416 bp Ori: QKE42116.1 Feature: domain Description: PRK10858 Location: 2619081-2619414 bp Feature: domain Description: PRK1 0858 Location: 261 9081 -261 941 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), DUF1874 (pfam08960), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), OmpW (pfam03922), PRK09249 (coproporphyrinogen dehydrogenase), RVT-GII, GIIM (pfam08388), PRK10858 (nitrogen regulatory protein P-II)