myRT

myRT report for GCA_013201075.1_ASM1320107v1

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Seq: CP053708.1 Acetobacteraceae bacterium strain PAMC 26569 chromosome, complete genome (4799761 bp)
Overview 1 RT 1: 1675699-1682839 bp Neighborhood of RT #1 [1675699, 1682871] SDR_a4 RVT-UG13 HTH_29 HTH_33 DDE_3 FocA Feature: gene Location: 1675699-1676580 bp Ori: QKE89949.1 Feature: domain Description: SDR_a4 Location: 1675726-1676509 bp Feature: domain Description: SDR_a4 Location: 1 675726-1 676509 bp Feature: gene Location: 1676920-1677222 bp Feature: gene Location: 1677301-1679103 bp Ori: QKE89951.1 Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 1677697-1678165 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 677697-1 6781 65 bp Feature: gene Location: 1680872-1681906 bp Ori: QKE89952.1 Feature: domain Description: HTH_29 Location: 1680923-1681109 bp Feature: domain Description: HTH_29 Location: 1 680923-1 681 1 09 bp Feature: domain Description: HTH_33 Location: 1681160-1681334 bp Feature: domain Description: HTH_33 Location: 1 681 1 60-1 681 334 bp Feature: domain Description: DDE_3 Location: 1681382-1681778 bp Feature: domain Description: DDE_3 Location: 1 681 382-1 681 778 bp Feature: gene Location: 1681999-1682871 bp Ori: QKE89953.1 Feature: domain Description: FocA Location: 1682125-1682839 bp Feature: domain Description: FocA Location: 1 6821 25-1 682839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SDR_a4 (cd05266), RVT-UG13, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), FocA (COG2116)

Seq: CP053712.1 Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed5, complete sequence (149789 bp)
Overview 1 RT 1: 40737-44637 bp Neighborhood of RT #1 [40737, 44645] DDE_3 InsE RVT-GII Rve fabG Feature: gene Location: 40737-40997 bp Ori: QKE93847.1 Feature: domain Description: DDE_3 Location: 40740-40911 bp Feature: domain Description: DDE_3 Location: 40740-40911 bp Feature: gene Location: 41088-42070 bp Feature: domain Description: InsE Location: 41091-41364 bp Feature: domain Description: InsE Location: 41091-41364 bp Feature: gene Location: 42616-43449 bp Ori: QKE93848.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42820-43420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 82 0-4342 0 bp Feature: gene Location: 43483-44157 bp Ori: QKE93849.1 Feature: domain Description: Rve Location: 43501-44116 bp Feature: domain Description: Rve Location: 43501-44116 bp Feature: gene Location: 44262-44645 bp Ori: QKE93850.1 Feature: domain Description: fabG Location: 44412-44637 bp Feature: domain Description: fabG Location: 44412 -44637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), InsE (COG2963), RVT-GII, Rve (COG3316), fabG (PRK12825)