myRT

myRT report for GCA_013201115.1_ASM1320111v1

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Seq: CP053706.1 Pseudomonas aeruginosa strain PAC1 chromosome, complete genome (7564383 bp)
Overview 1 RT 1: 2079257-2085981 bp 2 RT 2: 6135497-6141169 bp 3 RT 3: 6620801-6629645 bp Neighborhood of RT #1 [2079257, 2086001] Nitroreductase_2 MdlB RVT-GII GIIM Aldolase_II PRK00719 Neighborhood of RT #2 [6135497, 6141334] CHD CHD RVT-GII GIIM DUF772 Neighborhood of RT #3 [6620801, 6629653] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 2079257-2079856 bp Ori: QKF01599.1 Feature: domain Description: Nitroreductase_2 Location: 2079281-2079824 bp Feature: domain Description: Nitroreductase_2 Location: 2079281 -2079824 bp Feature: gene Location: 2079923-2081686 bp Ori: QKF01600.1 Feature: domain Description: MdlB Location: 2079932-2081660 bp Feature: domain Description: MdlB Location: 2079932-2081 660 bp Feature: gene Location: 2081905-2083389 bp Ori: QKF06512.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082322-2082937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082322-2082937 bp Feature: domain Description: GIIM Note: maturase Location: 2082994-2083210 bp Feature: domain Description: GIIM Note: maturase Location: 2082994-208321 0 bp Feature: gene Location: 2083757-2084494 bp Ori: QKF01601.1 Feature: domain Description: Aldolase_II Location: 2084042-2084369 bp Feature: domain Description: Aldolase_II Location: 2084042-2084369 bp Feature: gene Location: 2084841-2086001 bp Ori: QKF01602.1 Feature: domain Description: PRK00719 Location: 2084994-2085981 bp Feature: domain Description: PRK0071 9 Location: 2084994-2085981 bp Feature: gene Location: 6135497-6137041 bp Ori: QKF05150.1 Feature: domain Description: CHD Location: 6135713-6136127 bp Feature: domain Description: CHD Location: 61 3571 3-61 361 27 bp Feature: domain Description: CHD Location: 6136355-6136844 bp Feature: domain Description: CHD Location: 61 36355-61 36844 bp Feature: gene Location: 6138131-6138304 bp Feature: gene Location: 6139036-6140304 bp Ori: QKF05152.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6139249-6139906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 39249-61 39906 bp Feature: domain Description: GIIM Note: maturase Location: 6139984-6140206 bp Feature: domain Description: GIIM Note: maturase Location: 61 39984-61 40206 bp Feature: gene Location: 6140693-6140788 bp Feature: gene Location: 6140824-6141334 bp Feature: domain Description: DUF772 Location: 6140974-6141169 bp Feature: domain Description: DUF772 Location: 61 40974-61 41 1 69 bp Feature: gene Location: 6620801-6621475 bp Ori: QKF05566.1 Feature: domain Description: NTP_transferase_like_1 Location: 6620807-6621446 bp Feature: domain Description: NTP_transferase_like_1 Location: 6620807-6621 446 bp Feature: gene Location: 6621472-6622488 bp Ori: QKF05567.1 Feature: domain Description: COG3178 Location: 6621475-6622474 bp Feature: domain Description: COG31 78 Location: 6621 475-6622474 bp Feature: gene Location: 6623761-6625473 bp Ori: QKF05568.1 Gene: ltrA Feature: domain Description: RVT_N Location: 6623818-6624061 bp Feature: domain Description: RVT_N Location: 662381 8-6624061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6624106-6624742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66241 06-6624742 bp Feature: domain Description: YkfC Location: 6624949-6625102 bp Feature: domain Description: YkfC Location: 6624949-66251 02 bp Feature: domain Description: HNH Note: nucleases Location: 6625279-6625417 bp Feature: domain Description: HNH Note: nucleases Location: 6625279-662541 7 bp Feature: gene Location: 6625606-6628380 bp Ori: QKF05569.1 Feature: domain Description: LptD Location: 6625801-6628366 bp Feature: domain Description: LptD Location: 6625801 -6628366 bp Feature: gene Location: 6628361-6629653 bp Ori: QKF05570.1 Feature: domain Description: PRK10770 Location: 6628451-6629645 bp Feature: domain Description: PRK1 0770 Location: 6628451 -6629645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nitroreductase_2, MdlB (COG1132), RVT-GII, GIIM (pfam08388), Aldolase_II (smart01007), PRK00719 (alkanesulfonate monooxygenase; Provisional), CHD (cd07302), DUF772 (pfam05598), NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family )
RVT_N (pfam13655), YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)