myRT

myRT report for GCA_013201195.1_ASM1320119v1

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Seq: CP053723.1 Escherichia coli strain CP66-6_Sichuan chromosome, complete genome (4815440 bp)
Overview 1 RT 1: 718720-725259 bp 2 RT 2: 3758358-3763602 bp Neighborhood of RT #1 [718720, 725717] IS285 InsE RVT-GII GIIM PHA02517 HsdM Neighborhood of RT #2 [3758358, 3763602] Psu RVT-UG7 PRK09692 InsE Feature: gene Location: 718720-719511 bp Feature: domain Description: IS285 Location: 718723-719500 bp Feature: domain Description: IS285 Location: 71 8723-71 9500 bp Feature: gene Location: 719567-720306 bp Feature: domain Description: InsE Location: 719570-719906 bp Feature: domain Description: InsE Location: 71 9570-71 9906 bp Feature: gene Location: 720979-722487 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721237-721969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721 237-721 969 bp Feature: domain Description: GIIM Note: maturase Location: 722044-722242 bp Feature: domain Description: GIIM Note: maturase Location: 722044-722242 bp Feature: gene Location: 722568-723035 bp Feature: domain Description: PHA02517 Location: 722571-723030 bp Feature: domain Description: PHA0251 7 Location: 722571 -723030 bp Feature: gene Location: 723294-725717 bp Ori: QKF13079.1 Feature: domain Description: HsdM Location: 723315-725259 bp Feature: domain Description: HsdM Location: 72331 5-725259 bp Feature: gene Location: 3758358-3758930 bp Ori: QKF15740.1 Feature: domain Description: Psu Location: 3758376-3758913 bp Feature: domain Description: Psu Location: 3758376-375891 3 bp Feature: gene Location: 3759233-3759973 bp Feature: gene Location: 3759970-3761598 bp Ori: QKF15742.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3760378-3760807 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3760378-3760807 bp Feature: gene Location: 3761591-3762409 bp Feature: domain Description: PRK09692 Location: 3761597-3762386 bp Feature: domain Description: PRK09692 Location: 3761 597-3762386 bp Feature: gene Location: 3763341-3763602 bp Ori: QKF15743.1 Feature: domain Description: InsE Location: 3763368-3763602 bp Feature: domain Description: InsE Location: 3763368-3763602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), HsdM (COG0286), Psu (pfam07455), RVT-UG7, PRK09692 (Integrase; provisional)