myRT

myRT report for GCA_013256075.1_ASM1325607v1

Download annotations/find similar RTs

Seq: CP053898.1 Proteus mirabilis strain YPM35 chromosome, complete genome (4161306 bp)
Overview 1 RT 1: 1669068-1674166 bp 2 RT 2: 3316812-3324009 bp 3 RT 3: 3748569-3754135 bp Neighborhood of RT #1 [1669068, 1674166] PRK10354 ACD_IbpA-B_like RVT-AbiP2 Neighborhood of RT #2 [3316812, 3324017] YqiC ABC_ATPase ABC_ATPase RVT-Retrons PRK11316 PRK11072 Neighborhood of RT #3 [3748569, 3754140] VagC RVT-Retrons PRK10218 Feature: gene Location: 1669068-1669280 bp Ori: QKG48783.1 Gene: cspA Feature: domain Description: PRK10354 Location: 1669071-1669278 bp Feature: domain Description: PRK1 0354 Location: 1 669071 -1 669278 bp Feature: gene Location: 1669612-1670070 bp Ori: QKG48784.1 Feature: domain Description: ACD_IbpA-B_like Location: 1669744-1670011 bp Feature: domain Description: ACD_IbpA-B_like Location: 1 669744-1 67001 1 bp Feature: gene Location: 1670389-1671933 bp Ori: QKG48785.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1670806-1671259 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 670806-1 671 259 bp Feature: gene Location: 1672181-1673104 bp Feature: gene Location: 1673744-1674166 bp Feature: gene Location: 3316812-3317126 bp Ori: QKG50230.1 Feature: domain Description: YqiC Location: 3316815-3317067 bp Feature: domain Description: YqiC Location: 331 681 5-331 7067 bp Feature: gene Location: 3317187-3318494 bp Ori: QKG50231.1 Feature: domain Description: ABC_ATPase Location: 3317235-3317334 bp Feature: domain Description: ABC_ATPase Location: 331 7235-331 7334 bp Feature: domain Description: ABC_ATPase Location: 3317724-3317916 bp Feature: domain Description: ABC_ATPase Location: 331 7724-331 791 6 bp Feature: gene Location: 3318494-3319447 bp Ori: QKG50232.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3318617-3319175 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 331 861 7-331 91 75 bp Feature: gene Location: 3319658-3321082 bp Ori: QKG50233.1 Gene: hldE Feature: domain Description: PRK11316 Location: 3319661-3321077 bp Feature: domain Description: PRK1 1 31 6 Location: 331 9661 -3321 077 bp Feature: gene Location: 3321183-3324017 bp Ori: QKG50234.1 Gene: glnE Feature: domain Description: PRK11072 Location: 3321198-3324009 bp Feature: domain Description: PRK1 1 072 Location: 3321 1 98-3324009 bp Feature: gene Location: 3748569-3748802 bp Ori: QKG50588.1 Feature: domain Description: VagC Location: 3748587-3748773 bp Feature: domain Description: VagC Location: 3748587-3748773 bp Feature: gene Location: 3750093-3750293 bp Feature: gene Location: 3750551-3751501 bp Ori: QKG50590.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3750713-3751247 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 375071 3-3751 247 bp Feature: gene Location: 3751494-3751640 bp Feature: gene Location: 3752305-3754140 bp Ori: QKG50592.1 Gene: typA Feature: domain Description: PRK10218 Location: 3752326-3754135 bp Feature: domain Description: PRK1 021 8 Location: 3752326-37541 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10354 (RNA chaperone/antiterminator CspA), ACD_IbpA-B_like (cd06470), RVT-AbiP2, YqiC (COG2960), ABC_ATPase (pfam09818), RVT-Retrons, PRK11316 (bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE), PRK11072 (bifunctional adenylyltransferase), VagC (COG4456), PRK10218 (translational GTPase TypA)