myRT

myRT report for GCA_013256965.1_ASM1325696v1

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Seq: CP053913.1 Lactobacillus plantarum subsp. plantarum strain G1 plasmid p1, complete sequence (32876 bp)
Overview 1 RT 1: 18338-21887 bp Neighborhood of RT #1 [18338, 21895] PRK09564 RVT-GII GIIM DDE_Tnp_Tn3 2a45 Feature: gene Location: 18338-18724 bp Feature: gene Location: 18856-20220 bp Ori: QKG62165.1 Feature: domain Description: PRK09564 Location: 18871-20194 bp Feature: domain Description: PRK09564 Location: 1 8871 -201 94 bp Feature: gene Location: 20355-21257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20370-20811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20370-2081 1 bp Feature: domain Description: GIIM Note: maturase Location: 20865-21093 bp Feature: domain Description: GIIM Note: maturase Location: 20865-21 093 bp Feature: gene Location: 21421-21762 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 21427-21694 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 21 427-21 694 bp Feature: gene Location: 21818-21895 bp Ori: QKG62177.1 Feature: domain Description: 2a45 Location: 21821-21887 bp Feature: domain Description: 2a45 Location: 21 821 -21 887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09564 (coenzyme A disulfide reductase; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526), 2a45 (TIGR00935)

Seq: CP053912.1 Lactobacillus plantarum subsp. plantarum strain G1 chromosome, complete genome (3191656 bp)
Overview 1 RT 1: 146280-151360 bp Neighborhood of RT #1 [146280, 151368] COG4333 Phage_int_SAM_5 INT_ICEBs1_C_like RVT-Retrons gpmA Feature: gene Location: 146280-146906 bp Ori: QKG59414.1 Feature: domain Description: COG4333 Location: 146346-146775 bp Feature: domain Description: COG4333 Location: 146346-146775 bp Feature: gene Location: 146899-148029 bp Ori: QKG59415.1 Feature: domain Description: Phage_int_SAM_5 Location: 147088-147346 bp Feature: domain Description: Phage_int_SAM_5 Location: 147088-147346 bp Feature: domain Description: INT_ICEBs1_C_like Location: 147466-147967 bp Feature: domain Description: INT_ICEBs1_C_like Location: 147466-147967 bp Feature: gene Location: 148863-149807 bp Ori: QKG59416.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148992-149538 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148992 -149538 bp Feature: gene Location: 149913-150863 bp Feature: gene Location: 151141-151368 bp Ori: QKG59418.1 Feature: domain Description: gpmA Location: 151156-151360 bp Feature: domain Description: gpmA Location: 151156-151360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4333 (Uncharacterized protein ), Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189), RVT-Retrons, gpmA (PRK14120)