myRT

myRT report for GCA_013267475.1_ASM1326747v1

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Seq: CP053997.1 Bacillus cereus strain FDAARGOS_780 chromosome, complete genome (5271040 bp)
Overview 1 RT 1: 1096633-1107682 bp 2 RT 2: 1168114-1173126 bp 3 RT 3: 4621670-4626793 bp 4 RT 4: 5227028-5237768 bp Neighborhood of RT #1 [1096633, 1107684] PRK12451 RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW DUF393 Nfu_N Virulence_fact HEAT RVT_N RVT-GII GIIM PRK06752 DUF4318 Neighborhood of RT #2 [1168114, 1173126] spore_ytfJ RVT_N RVT-GII GIIM Neighborhood of RT #3 [4621670, 4626891] caa3_CtaG amiF RVT-GII HNHc amiF YugN Neighborhood of RT #4 [5227028, 5237905] PRK12420 YbaK_EbsC RVT_N RVT-GII GIIM MTH1 Hit RVT_N RVT-GII GIIM HTH_3 TPR_12 Hydrolase_4 Feature: gene Location: 1096633-1098321 bp Ori: QKH72832.1 Gene: argS Feature: domain Description: PRK12451 Location: 1096636-1098319 bp Feature: domain Description: PRK1 2451 Location: 1 096636-1 09831 9 bp Feature: gene Location: 1098622-1098843 bp Feature: gene Location: 1098947-1100764 bp Ori: QKH72833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099211-1100042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 09921 1 -1 1 00042 bp Feature: domain Description: Intron_maturas2 Location: 1100123-1100414 bp Feature: domain Description: Intron_maturas2 Location: 1 1 001 23-1 1 0041 4 bp Feature: domain Description: HNHc Note: nucleases Location: 1100561-1100738 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 00561 -1 1 00738 bp Feature: gene Location: 1101392-1101946 bp Feature: domain Description: SAM_MT Location: 1101515-1101947 bp Feature: domain Description: SAM_MT Location: 1 1 01 51 5-1 1 01 947 bp Feature: gene Location: 1101996-1102430 bp Ori: QKH72834.1 Feature: domain Description: YphP_YqiW Location: 1102020-1102428 bp Feature: domain Description: YphP_YqiW Location: 1 1 02020-1 1 02428 bp Feature: gene Location: 1102514-1102897 bp Ori: QKH72835.1 Feature: domain Description: DUF393 Location: 1102523-1102841 bp Feature: domain Description: DUF393 Location: 1 1 02523-1 1 02841 bp Feature: gene Location: 1102901-1104028 bp Ori: QKH72836.1 Feature: domain Description: Nfu_N Location: 1102919-1103165 bp Feature: domain Description: Nfu_N Location: 1 1 0291 9-1 1 031 65 bp Feature: domain Description: Virulence_fact Location: 1103222-1103456 bp Feature: domain Description: Virulence_fact Location: 1 1 03222-1 1 03456 bp Feature: domain Description: HEAT Location: 1103567-1104017 bp Feature: domain Description: HEAT Location: 1 1 03567-1 1 0401 7 bp Feature: gene Location: 1104403-1106049 bp Ori: QKH72837.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1104445-1104682 bp Feature: domain Description: RVT_N Location: 1 1 04445-1 1 04682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1104736-1105396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 04736-1 1 05396 bp Feature: domain Description: GIIM Note: maturase Location: 1105465-1105696 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 05465-1 1 05696 bp Feature: gene Location: 1106936-1107271 bp Ori: QKH72838.1 Feature: domain Description: PRK06752 Location: 1106939-1107269 bp Feature: domain Description: PRK06752 Location: 1 1 06939-1 1 07269 bp Feature: gene Location: 1107430-1107684 bp Ori: QKH72839.1 Feature: domain Description: DUF4318 Location: 1107475-1107682 bp Feature: domain Description: DUF431 8 Location: 1 1 07475-1 1 07682 bp Feature: gene Location: 1168114-1168539 bp Ori: QKH72896.1 Gene: ytfJ Feature: domain Description: spore_ytfJ Location: 1168120-1168489 bp Feature: domain Description: spore_ytfJ Location: 1 1 681 20-1 1 68489 bp Feature: gene Location: 1169507-1169830 bp Feature: gene Location: 1170464-1172110 bp Ori: QKH72898.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1170506-1170743 bp Feature: domain Description: RVT_N Location: 1 1 70506-1 1 70743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1170797-1171457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 70797-1 1 71 457 bp Feature: domain Description: GIIM Note: maturase Location: 1171526-1171757 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 71 526-1 1 71 757 bp Feature: gene Location: 1172352-1172694 bp Feature: gene Location: 1172935-1173126 bp Feature: gene Location: 4621670-4622575 bp Ori: QKH76244.1 Gene: ctaG Feature: domain Description: caa3_CtaG Location: 4621679-4622519 bp Feature: domain Description: caa3_CtaG Location: 4621 679-462251 9 bp Feature: gene Location: 4622802-4623173 bp Gene: amiF Feature: domain Description: amiF Location: 4622805-4623174 bp Feature: domain Description: amiF Location: 4622805-46231 74 bp Feature: gene Location: 4623907-4625739 bp Ori: QKH76245.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4624207-4624912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4624207-462491 2 bp Feature: domain Description: HNHc Note: nucleases Location: 4625491-4625623 bp Feature: domain Description: HNHc Note: nucleases Location: 4625491 -4625623 bp Feature: gene Location: 4625856-4626479 bp Feature: domain Description: amiF Location: 4625859-4626474 bp Feature: domain Description: amiF Location: 4625859-4626474 bp Feature: gene Location: 4626526-4626891 bp Ori: QKH76246.1 Feature: domain Description: YugN Location: 4626547-4626793 bp Feature: domain Description: YugN Location: 4626547-4626793 bp Feature: gene Location: 5227028-5228305 bp Ori: QKH76802.1 Gene: hisS Feature: domain Description: PRK12420 Location: 5227031-5228291 bp Feature: domain Description: PRK1 2420 Location: 5227031 -5228291 bp Feature: gene Location: 5228646-5229122 bp Ori: QKH76803.1 Gene: ybaK Feature: domain Description: YbaK_EbsC Location: 5228664-5229114 bp Feature: domain Description: YbaK_EbsC Location: 5228664-52291 1 4 bp Feature: gene Location: 5230207-5231853 bp Ori: QKH76804.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5230249-5230486 bp Feature: domain Description: RVT_N Location: 5230249-5230486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5230540-5231200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5230540-5231 200 bp Feature: domain Description: GIIM Note: maturase Location: 5231269-5231500 bp Feature: domain Description: GIIM Note: maturase Location: 5231 269-5231 500 bp Feature: gene Location: 5232074-5232562 bp Ori: QKH76805.1 Feature: domain Description: MTH1 Location: 5232083-5232494 bp Feature: domain Description: MTH1 Location: 5232083-5232494 bp Feature: gene Location: 5232587-5233060 bp Ori: QKH76806.1 Feature: domain Description: Hit Location: 5232623-5233013 bp Feature: domain Description: Hit Location: 5232623-523301 3 bp Feature: gene Location: 5233804-5235450 bp Ori: QKH76807.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5233846-5234083 bp Feature: domain Description: RVT_N Location: 5233846-5234083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5234137-5234797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52341 37-5234797 bp Feature: domain Description: GIIM Note: maturase Location: 5234866-5235097 bp Feature: domain Description: GIIM Note: maturase Location: 5234866-5235097 bp Feature: gene Location: 5235809-5236933 bp Ori: QKH76808.1 Feature: domain Description: HTH_3 Location: 5235839-5236001 bp Feature: domain Description: HTH_3 Location: 5235839-5236001 bp Feature: domain Description: TPR_12 Location: 5236604-5236697 bp Feature: domain Description: TPR_1 2 Location: 5236604-5236697 bp Feature: gene Location: 5236943-5237905 bp Ori: QKH76809.1 Feature: domain Description: Hydrolase_4 Location: 5237108-5237768 bp Feature: domain Description: Hydrolase_4 Location: 52371 08-5237768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12451 (arginyl-tRNA synthetase; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SAM_MT (pfam04445), YphP_YqiW (TIGR04191), DUF393 (pfam04134), Nfu_N (smart00932), Virulence_fact (pfam13769), HEAT (sd00044)
RVT_N (pfam13655), GIIM (pfam08388), PRK06752 (single-stranded DNA-binding protein; Validated), DUF4318 (pfam14201), spore_ytfJ (TIGR02874), caa3_CtaG (TIGR02737), amiF (PRK13287), YugN (pfam08868), PRK12420 (histidyl-tRNA synthetase; Provisional), YbaK_EbsC (TIGR00011)
MTH1, Hit (COG0537), HTH_3 (pfam01381), TPR_12 (pfam13424), Hydrolase_4 (pfam12146)

Seq: CP053994.1 Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence (312478 bp)
Overview 1 RT 1: 124755-132142 bp 2 RT 2: 154662-160479 bp 3 RT 3: 174062-180703 bp 4 RT 4: 188099-196686 bp 5 RT 5: 212099-218266 bp Neighborhood of RT #1 [124755, 132156] RVT_N RVT-GII GIIM nuc_hydro DEXXQc_Upf1-like KOG1803 Neighborhood of RT #2 [154662, 160586] RVT-GII HNHc E1_enzyme_family PRTRC_A Neighborhood of RT #3 [174062, 180738] DUF3854 RVT-GII GIIM HNHc HTH_XRE Neighborhood of RT #4 [188099, 196784] Replic_Relax RVT-GII Intron_maturas2 HNHc TraG-D_C xerC Neighborhood of RT #5 [212099, 218266] TcpE AAA_10 RVT-GII HNHc AAA_10 Feature: gene Location: 124755-124982 bp Feature: gene Location: 125148-125390 bp Feature: gene Location: 125591-127237 bp Ori: QKH71520.1 Gene: ltrA Feature: domain Description: RVT_N Location: 125633-125870 bp Feature: domain Description: RVT_N Location: 12 5633-12 5870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125924-126584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 592 4-12 6584 bp Feature: domain Description: GIIM Note: maturase Location: 126653-126884 bp Feature: domain Description: GIIM Note: maturase Location: 12 6653-12 6884 bp Feature: gene Location: 127957-128907 bp Ori: QKH71521.1 Feature: domain Description: nuc_hydro Location: 127972-128878 bp Feature: domain Description: nuc_hydro Location: 12 7972 -12 8878 bp Feature: gene Location: 129340-132156 bp Ori: QKH71522.1 Feature: domain Description: DEXXQc_Upf1-like Location: 130399-131608 bp Feature: domain Description: DEXXQc_Upf1-like Location: 130399-131608 bp Feature: domain Description: KOG1803 Location: 131824-132142 bp Feature: domain Description: KOG1803 Location: 13182 4-132 142 bp Feature: gene Location: 154662-155639 bp Feature: gene Location: 156022-156549 bp Feature: gene Location: 156613-158493 bp Ori: QKH71549.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156943-157672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156943-157672 bp Feature: domain Description: HNHc Note: nucleases Location: 158230-158380 bp Feature: domain Description: HNHc Note: nucleases Location: 1582 30-158380 bp Feature: gene Location: 159193-159594 bp Ori: QKH71550.1 Feature: domain Description: E1_enzyme_family Location: 159241-159577 bp Feature: domain Description: E1_enzyme_family Location: 1592 41-159577 bp Feature: gene Location: 159591-160586 bp Ori: QKH71551.1 Feature: domain Description: PRTRC_A Location: 160125-160479 bp Feature: domain Description: PRTRC_A Location: 16012 5-160479 bp Feature: gene Location: 174062-174292 bp Feature: gene Location: 174785-176026 bp Ori: QKH71684.1 Feature: domain Description: DUF3854 Location: 175673-175994 bp Feature: domain Description: DUF3854 Location: 175673-175994 bp Feature: gene Location: 176061-177884 bp Ori: QKH71683.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176355-177054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176355-177054 bp Feature: domain Description: GIIM Note: maturase Location: 177138-177381 bp Feature: domain Description: GIIM Note: maturase Location: 177138-177381 bp Feature: domain Description: HNHc Note: nucleases Location: 177627-177765 bp Feature: domain Description: HNHc Note: nucleases Location: 17762 7-177765 bp Feature: gene Location: 178944-180494 bp Feature: gene Location: 180496-180738 bp Ori: QKH71567.1 Feature: domain Description: HTH_XRE Location: 180565-180703 bp Feature: domain Description: HTH_XRE Location: 180565-180703 bp Feature: gene Location: 188099-189649 bp Ori: QKH71574.1 Feature: domain Description: Replic_Relax Location: 188195-188918 bp Feature: domain Description: Replic_Relax Location: 188195-188918 bp Feature: gene Location: 189621-191300 bp Feature: gene Location: 191925-193742 bp Ori: QKH71575.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192189-193020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192 189-19302 0 bp Feature: domain Description: Intron_maturas2 Location: 193101-193392 bp Feature: domain Description: Intron_maturas2 Location: 193101-193392 bp Feature: domain Description: HNHc Note: nucleases Location: 193539-193716 bp Feature: domain Description: HNHc Note: nucleases Location: 193539-193716 bp Feature: gene Location: 193843-195243 bp Feature: domain Description: TraG-D_C Location: 193990-194353 bp Feature: domain Description: TraG-D_C Location: 193990-194353 bp Feature: gene Location: 195810-196784 bp Ori: QKH71576.1 Feature: domain Description: xerC Location: 195837-196686 bp Feature: domain Description: xerC Location: 195837-196686 bp Feature: gene Location: 212099-212503 bp Ori: QKH71586.1 Feature: domain Description: TcpE Location: 212135-212408 bp Feature: domain Description: TcpE Location: 2 12 135-2 12 408 bp Feature: gene Location: 212563-214077 bp Feature: domain Description: AAA_10 Location: 213904-214078 bp Feature: domain Description: AAA_10 Location: 2 13904-2 14078 bp Feature: gene Location: 214814-216646 bp Ori: QKH71587.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215114-215819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 15114-2 15819 bp Feature: domain Description: HNHc Note: nucleases Location: 216398-216530 bp Feature: domain Description: HNHc Note: nucleases Location: 2 16398-2 16530 bp Feature: gene Location: 216763-217782 bp Feature: domain Description: AAA_10 Location: 216769-217666 bp Feature: domain Description: AAA_10 Location: 2 16769-2 17666 bp Feature: gene Location: 217784-218266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase ), HNHc (smart00507), E1_enzyme_family (cl22428), PRTRC_A (TIGR03735), DUF3854 (pfam12965)
HTH_XRE (smart00530), Replic_Relax (pfam13814), Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), xerC (PRK01287), TcpE (pfam12648), AAA_10 (pfam12846)